Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0599 ATGGCTCCTGCTAGCTCACCGTCACGCTCGGCGAAGAGGCTCATCGGTTTTAGCCGGCGGACGCAGGCGCTGCACCCTCGCCGGCGGCCGGCATGCGGGCCACCGGAGAAGAAGTACCGCTCGATGACGGACATAATGGCGAGGGCACCGTACGCGGTGGTGGAGAACGAGGATTACAGCGACCTGAGCTGCGAGCAATGTGGCTCCGACGAGAGGCCGGAGGAGCTCCTTCTCTGCGATAAATGCGACAAAGGCTTCCACATGAAATGCGCGAGGCCAATCGTCGTTAGGGTCCCGATTGGATCCTGGGTTTGCCCTAAGTGTGTCGGAGACAGGCAGACGAGGATAATCAAAAGTTTCTCTCAGCGGAAGATAATTGATTTCTTCGGAATTGAGGAGAGTGATGATGATCGCAACGGTGGACGTAGAGGTGCGGCTACTTCTCATGAAACTAAGAAGCGTAAGAGACGGTCAACATCTCTGGTATTGCAGAAGAAAAAGAGGAGATTATTACCATTTGTTCCTTCAGAAGATCCTGCCCAGAGAATGAAACAGATGCGTTCTCTTGCTTCTGCTTTATCAGCATTGCATATGAAATTCAGTGATGATCTCACATACATGCGTGGAATGGCTCCTAGATCTGCTAATCAATCCAGTTTAGAAAATGGCGGCATGCAGATTCTAACCAAGGAAGATATGGAGACTTTGGAGCACTGCAAAGCTATGTCTAGAAGAGGCGAATGCGCTCCCTTTATGATTCTTTATGATGCATGTGAAGGCTATACTGTGGTGGCTGATGGCCCAATCAAGGATATGACGTTTATTGCTGAATACACTGGCGATGTGGATTACATTAAGAATAGAGAACGTGATGATTGTGACAGTATGATGACCCTTCTTCTAACGACCGAGCCTGCTCAAAGTCTTGTCATCTGTCCTGATAAACGTGGAAACATTGCTCGCTTTATTAATGGCATCAACAACCATACTCCGGAAGGTAGGAAGAAGCAGAACTGTAAATGTCTGAGATACAATGTTAATGGTGAGTGCAGGGTCTTCTTGGTTGCGACTCGTGATATTTCTAAGGGCGAGAGGCTTTATTATGATTATAATGGTTATGAGCATGAATACCCTACTCAACATTTTGTCTGA 1152 0.4792 MAPASSPSRSAKRLIGFSRRTQALHPRRRPACGPPEKKYRSMTDIMARAPYAVVENEDYSDLSCEQCGSDERPEELLLCDKCDKGFHMKCARPIVVRVPIGSWVCPKCVGDRQTRIIKSFSQRKIIDFFGIEESDDDRNGGRRGAATSHETKKRKRRSTSLVLQKKKRRLLPFVPSEDPAQRMKQMRSLASALSALHMKFSDDLTYMRGMAPRSANQSSLENGGMQILTKEDMETLEHCKAMSRRGECAPFMILYDACEGYTVVADGPIKDMTFIAEYTGDVDYIKNRERDDCDSMMTLLLTTEPAQSLVICPDKRGNIARFINGINNHTPEGRKKQNCKCLRYNVNGECRVFLVATRDISKGERLYYDYNGYEHEYPTQHFV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0599 383 SUPERFAMILY FYVE/PHD zinc finger 50 115 IPR011011 -
Aev08g0599 383 MobiDBLite consensus disorder prediction 1 37 - -
Aev08g0599 383 ProSiteProfiles Zinc finger PHD-type profile. 61 111 IPR019787 -
Aev08g0599 383 Pfam PHD-finger 64 109 IPR019787 -
Aev08g0599 383 SMART PHD_3 63 109 IPR001965 -
Aev08g0599 383 Pfam SET domain 135 371 IPR001214 GO:0005515
Aev08g0599 383 ProSitePatterns Zinc finger PHD-type signature. 64 108 IPR019786 -
Aev08g0599 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 121 IPR013083 -
Aev08g0599 383 SUPERFAMILY SET domain 243 371 IPR046341 -
Aev08g0599 383 PANTHER HISTONE ACETYLTRANSFERASE 11 381 - -
Aev08g0599 383 Gene3D SET domain 155 383 IPR046341 -
Aev08g0599 383 ProSiteProfiles SET domain profile. 249 371 IPR001214 GO:0005515
Aev08g0599 383 MobiDBLite consensus disorder prediction 136 161 - -
Aev08g0599 383 CDD SET_ATXR5_6-like 246 383 - -
Aev08g0599 383 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR5 11 381 - -
Aev08g0599 383 SMART set_7 249 377 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0599 Aev-Chr8 3430582 3433807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0599 35 138 C2H2 Transcription Factor Family AT3G01460 31.624 1.30e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev08g0599 SET 4.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0599 K24406 - tcc:18611813 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0599 08 3430582 3433807 Aev08g0599 08 3430582 3433807 ECH