Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev08g0596 | ATGGCATTGCTGAGGGAAGCGCGTGGCATTACAGGCTTGAAGGATGTTCGGGGAGGGGGCGGAGGAGAGGGAGAGGGAGAGGGAGAGGGAGAAGGTGAGGATGATGCAGAGAGTGAGGGAGAGGGAGAGGATGGTGGCCATTGTGAGGATGAGGAAGGTGGATCTGACCACACTGCAAACATTACAGCTTTGGCTAGTGAAATGAGTGGAAGTGGCAGAAAGCGCTCTTCAAAGTGGGATTTGGGAGATGGTTCTGAATTTGCACCTGATAGTAAGCAATTACGGTCCAGATGGTCCTCTGAAGATGTTGCTGGTAGCAATAATTCAAAGCGACCCCATATTGAAGGAAATGACAAGTTGAAACCTGGCTTGGGTAGGGAACCTTTTTCTGGAGGCAGAGGTTCAAATAAAGATGATATTATGGATAAAGACTACAGAGGTATGGATGCAGAAATAGAGTGGGAAGCAGATGCAAGCTACAGCAAGAAAATATCTCCTGGGTTTGAGGAATGGCAACATCAGAGACATAATCAATCTCCAAAAAATGTTCGGATAAGATCAGGCAGGAGTAGTAGGAGCCGAAGCCCTCCCCATGGGTTTAGATTGGATTCAGGAGTCAATGACAGAAATAGAATGAGGGGTGGAGGATCAACACAAATTTGTAGAGATTTTTCTGCTGGTAAGTGCAGAAGAGGCAGCAATTGCCATTTTCTTCACCATGATGACCACAATTATGAGGATAGTTGGGAAAGTAAAAACAGGGAAGATGGAGCTCCCAGATATTCAGATCCACATGAGCGTAGGGACCATTCACATAAGAGTGGTAGGTCTAATGAAGCTTGTATTCATTTTGCAAAAGGCAGGTGTAGAATGGGAGCATCATGCAAATATGTGCATCATGACATTTCTGATGGGTATGGTAAAAGTTCAGTTGATGAATTACAGAGAGAAAGGGATAATGATGGGAGGCGCAAAGATAATTCTTTTGAGCAGGGCAGTGGACATGTGCCAAACCGCGGTGGTGATACTCTTTGCAAATTTTTTGCTAATGGAAATTGTCGTAATGGTAAATATTGTAGGTTTTCTCATGATATGCAAACATGTAGGAGCCCTAATAGAAGGTTAAGGGATGAAAAGTGGGGAAGCAGTCCAGGTGGAGATCATCAGACATTGGATAGACCAAAATTGAGTGATTCATTTAGTCCTAATGGAAGGTTAAGAACTGATAGATGGGGTATAGATGGCAGTATGTCTGATGCAGATAAAGCGTGGGACAGTCCAAAGCAGAATGATATAGTTGTTGTCTCTGATTCAGCAAAGCTGGTTGAAGATAAAGTTGGAGATATGGGTGCAACTGATCCTGGTCTTACTGTATGGCCTATGAGAGATGCACAGGATCATAGTTTAGATAAGAGCAGGGTGCATGGTGAACCCCCATTTTCAAGTGATAAGAAGGAAGCTGACCATTGGCTAGCAGAAAATGCTGGTGCCAACATGCACACTCCCCAGACAGTAGGTATAGACATTTGGCCTGGTGATTCAAAAATGTCTCCTGATTGGAACTATAGGGTAGGATCTTCCAGCCATATAGAAGAAGAGCATGGGAAGATTATTGCCGGGTTAACCCAGGGCAGTACGCAATTAGCCACAGCCGAACATGACAGAGTACAAGTTACTCCAGGACAAGACTTGAATCAGAATTTGCAAAATGTTAATGCTTGGGATTCTTCAAGACTCCATGCAGTTGAACAAGTTCAAGTGGCAGTTCCTATTCTTCCATCAAAAGCAGGAGCCATTGAAGGTTTGCAAAACCAAGAAGTCTCTTCTGAGAAAAAGTACTCTGTTGAACCGAATATCATGGATGCAGGCTCATCACAGATTAGTTCCAGAAATCCTCCAATGCAGGACATGGTAAGCAAAGAACAGCTTGCTCAATTGTCCAATCTCTCAGTCTCTTTGGCTCATATCCTTGGATCAGGTCAGCAATTGCCACAACTCTATGCTGCCTTAAATCCTCACAATGTTAAGGACCCTCCTTCCCAAGCCAAAACTGAAGTGCCTACTACAATGGTTTCCAATACATTGGTCAAGCCAGATCCTGATGTTGGATTCCCAAAGCCGTATGATCCAATGTGTGATAGTATTGAGCTAAAGGAAGCTGTTGCTAGTGGGAAACAAAATTGTGGTGATTCTTCTAAGGATAACAATGAAGTGGTAGCTGAGGAAAGACCAAATTCTCTAGATGGTCTTAAAAATACAAAAGAGAATGGTCCTTTGGAAAACATGGACCGGAATGGTGGACCAGATGAGGCCAAGAAACCCAAGGATGTAAAGGGGATTCGTGCATTTAAATTTTCATTGGTTGAGTTTGTTAAGGAGCTTCTGAAACCAACATGGAAAGAAGGTCAAATCACTAAAGAAGATTATAAAACAATTGTGAAAAAAGTTGTTGATAAAGTAACTGGTACCATGCAGGAGGGCCATATTCCTCAGACACAAGAGAAAATTGACCATTATTTGTCATTTTCAAAACCAAAGCTTAACAAACTTGTACAGGCATATGTGGAAAAGGTTCAGAAGCCCCAGTGA | 2589 | 0.4303 | MALLREARGITGLKDVRGGGGGEGEGEGEGEGEDDAESEGEGEDGGHCEDEEGGSDHTANITALASEMSGSGRKRSSKWDLGDGSEFAPDSKQLRSRWSSEDVAGSNNSKRPHIEGNDKLKPGLGREPFSGGRGSNKDDIMDKDYRGMDAEIEWEADASYSKKISPGFEEWQHQRHNQSPKNVRIRSGRSSRSRSPPHGFRLDSGVNDRNRMRGGGSTQICRDFSAGKCRRGSNCHFLHHDDHNYEDSWESKNREDGAPRYSDPHERRDHSHKSGRSNEACIHFAKGRCRMGASCKYVHHDISDGYGKSSVDELQRERDNDGRRKDNSFEQGSGHVPNRGGDTLCKFFANGNCRNGKYCRFSHDMQTCRSPNRRLRDEKWGSSPGGDHQTLDRPKLSDSFSPNGRLRTDRWGIDGSMSDADKAWDSPKQNDIVVVSDSAKLVEDKVGDMGATDPGLTVWPMRDAQDHSLDKSRVHGEPPFSSDKKEADHWLAENAGANMHTPQTVGIDIWPGDSKMSPDWNYRVGSSSHIEEEHGKIIAGLTQGSTQLATAEHDRVQVTPGQDLNQNLQNVNAWDSSRLHAVEQVQVAVPILPSKAGAIEGLQNQEVSSEKKYSVEPNIMDAGSSQISSRNPPMQDMVSKEQLAQLSNLSVSLAHILGSGQQLPQLYAALNPHNVKDPPSQAKTEVPTTMVSNTLVKPDPDVGFPKPYDPMCDSIELKEAVASGKQNCGDSSKDNNEVVAEERPNSLDGLKNTKENGPLENMDRNGGPDEAKKPKDVKGIRAFKFSLVEFVKELLKPTWKEGQITKEDYKTIVKKVVDKVTGTMQEGHIPQTQEKIDHYLSFSKPKLNKLVQAYVEKVQKPQ* | 863 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 370 | 413 | - | - | |
Aev08g0596 | 862 | SMART | c3hfinal6 | 276 | 301 | IPR000571 | GO:0046872 | |
Aev08g0596 | 862 | SMART | c3hfinal6 | 339 | 365 | IPR000571 | GO:0046872 | |
Aev08g0596 | 862 | SMART | c3hfinal6 | 215 | 241 | IPR000571 | GO:0046872 | |
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 306 | 330 | - | - | |
Aev08g0596 | 862 | PANTHER | ZINC FINGER CCCH DOMAIN PROTEIN-RELATED | 68 | 725 | - | - | |
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 92 | 111 | - | - | |
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 1 | 144 | - | - | |
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 26 | 49 | - | - | |
Aev08g0596 | 862 | PANTHER | ZINC FINGER CCCH DOMAIN PROTEIN-RELATED | 730 | 859 | - | - | |
Aev08g0596 | 862 | SUPERFAMILY | CCCH zinc finger | 342 | 364 | IPR036855 | GO:0046872 | |
Aev08g0596 | 862 | Pfam | CCCH-type zinc finger | 344 | 364 | IPR041367 | - | |
Aev08g0596 | 862 | Pfam | RNA-binding, Nab2-type zinc finger | 280 | 299 | - | - | |
Aev08g0596 | 862 | Gene3D | - | 212 | 316 | - | - | |
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 306 | 336 | - | - | |
Aev08g0596 | 862 | ProSiteProfiles | Zinc finger C3H1-type profile. | 215 | 242 | IPR000571 | GO:0046872 | |
Aev08g0596 | 862 | ProSiteProfiles | Zinc finger C3H1-type profile. | 339 | 366 | IPR000571 | GO:0046872 | |
Aev08g0596 | 862 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 218 | 240 | IPR000571 | GO:0046872 | |
Aev08g0596 | 862 | Gene3D | - | 336 | 388 | - | - | |
Aev08g0596 | 862 | PANTHER | PROTEIN FRIGIDA-ESSENTIAL 1 | 730 | 859 | - | - | |
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 165 | 220 | - | - | |
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 246 | 276 | - | - | |
Aev08g0596 | 862 | MobiDBLite | consensus disorder prediction | 723 | 774 | - | - | |
Aev08g0596 | 862 | ProSiteProfiles | Zinc finger C3H1-type profile. | 275 | 303 | IPR000571 | GO:0046872 | |
Aev08g0596 | 862 | PANTHER | PROTEIN FRIGIDA-ESSENTIAL 1 | 68 | 725 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev08g0596 | Aev-Chr8 | 3411880 | 3419515 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Aev08g0596 | zf-CCCH | 1.4e-05 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev08g0596 | - | K22909 | gmx:100783856 | 1065.45 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev08g0596 | 08 | 3411880 | 3419515 | Aev08g0596 | 08 | 3411880 | 3419515 | ECH | |
Aev03g2901 | 03 | 28349712 | 28353872 | Aev08g0596 | 08 | 3411880 | 3419515 | ECH |