Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0594 ATGGATAGTAGTAGTAATAATAATCAGAACACATTGTTGATGACAAATGTTGTTAGCAGCAGCAGCAGCCGCAGTAATTGGAATAATCAGAAGATGATGGAAACAACAGCACAAGAACAGCAACACAACAACAGCAACAGCAACAGCATCACTACTACTACTGCTACTTTCCATCATGATCATCATCATCAGCAACAACAAATTCCAATATGCTCTGCCGCTGGAGCTCTAATCTGGCCCAACAACCACCCTCTTCACATGATACCCCCACCACCCTCTTCTTCTTCTTCCTCATCCTCTTCTAGCTTCTTCAATGAAATACTGGGGGGAATAATCCAATTGGACGAAGACGCAGAGGCAGAGGAAGAAGAAGAAGAAGAGGAGCTGGGAGCGATGAAGGAGATGATGTACAAGATCGCAGCTATGCAGCCAGTGGAGATCGACCCGGCAACGATCCGAAAGCCGAAAAGGCGAAACGTGAGAATCAGCGAGGATCCACAGAGTGTGGCAGCGCGGCACCGGAGAGAGCGGATCAGTGAAAGGATCCGAATCCTGCAGAGGCTCGTCCCCGGCGGCACCAAGATGGACACCGCTTCCATGCTCGACGAAGCCATTCGTTATGTCAAATTCCTCAAGAGACAGATCAGGCTGCTACAATCACTCCCCATCACTAATACCTTTAATCATAATCATAATATTAATAATAATTGCATAGCTCCCGGCAGTGATTCAGCTTATTGGCCTCCTACTTTTGCATCAAATATGCTAATTCATGGCTCTGTTGCCGCTCCCCCCGCTAGTTCCATGGACATCCCCCCCGCTGGAATGGGATTCGGTACAATCAGCCATGCCCATGCCCGTGATGACCCACCCACCTTCCTCCACCACCTTCGATCTTCATAA 903 0.4839 MDSSSNNNQNTLLMTNVVSSSSSRSNWNNQKMMETTAQEQQHNNSNSNSITTTTATFHHDHHHQQQQIPICSAAGALIWPNNHPLHMIPPPPSSSSSSSSSSFFNEILGGIIQLDEDAEAEEEEEEEELGAMKEMMYKIAAMQPVEIDPATIRKPKRRNVRISEDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSLPITNTFNHNHNINNNCIAPGSDSAYWPPTFASNMLIHGSVAAPPASSMDIPPAGMGFGTISHAHARDDPPTFLHHLRSS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0594 300 CDD bHLH_AtIND_like 163 221 - -
Aev08g0594 300 SMART finulus 168 217 IPR011598 GO:0046983
Aev08g0594 300 Gene3D - 165 229 IPR036638 GO:0046983
Aev08g0594 300 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 24 272 - -
Aev08g0594 300 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 222 IPR036638 GO:0046983
Aev08g0594 300 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Aev08g0594 300 Coils Coil 115 135 - -
Aev08g0594 300 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 24 272 IPR045843 GO:0003700|GO:0006355
Aev08g0594 300 Pfam Helix-loop-helix DNA-binding domain 172 211 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0594 Aev-Chr8 3407201 3408103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0594 131 219 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 79.775 4.88e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g0594 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0594 - - aprc:113856609 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0594 08 3407201 3408103 Aev08g0594 08 3407201 3408103 ECH
Aev03g2902 03 28360735 28361664 Aev08g0594 08 3407201 3408103 PCT