Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0590 ATGGCCGAAATGAAATTGATTCCAGGGTTTCGGTTTCATCCAACTGACGTTGAGCTGATACTGTACTTTCTGAAGAGGAAGGTGCTGAGGAAAAAGATCCCTTTTGATGTCATTGCTGAAGTTGACATATACAAGTATCCTCCGTGGGATCTCCCAGCTCATTCTTTACTCAAAAATGGGGATTTGGAATGGTACTTCTTTTGCCCTCGAGGAAAGAAGTACGCGAGTGGTGCAAGGATGAATAGGGCAACAGAAGGTGGGTACTGGAAGACCACTGGTAAAGATAGATCAATTGAACACAAGAAGCTTGTTGTGGGGATGATAAAAACACTGGTGTTTCACACTGGTAAAGCACCTAAGGGAGATCGAACTGATTGGGTTATGCATGAGTTTCGACTAGAAGATAAGAACCTCTCAGACAAAGGCATTCCACAGGACTCCTATGTCATCTGTAAGGTATTCCAAAAGGATGGTCCTGGTCCAAGGAATGGTGCACAATATGGAAAACCATTTAATGAGGAGGACTGGGACGAGGAAGAGGAAATTGGTGGTGTAGAATCTATCCCTGATGCTCAATCTGTGCCAATTCCCATTCAACCTACCACATGCGATAGTTCTGTTGTAAATGACAGGCATCCCTCTACCAGTGAAGATTACTTTTTAGGAATGGTTGATTATTCCAAAGATGATGACACAACGGCTCTGAATGAAAGCACCGTCATTGAGGAGGCTGATAATCCTGCTCATGCAAATAATGGTGATCCAAATAATGGTGAAGTTGCACCTTATTTTGATCCAGATGAGATCTTTGTGGACTTGGGGGACCTTGACAGCATGGTCGTATTGGGTGAGGATGGACATGGACATGGTGATCGGAATGGCGAGTATACTCCAAATGACATGCTTATAACAGCTGATGATAACTTGTGGTTGTCCGATTCCCACGATTTCTTGGAATTGGATGACCTTGAAGCACCATTGTTCTGGCAGAATCAGCAGGGTAAGTAA 1008 0.4375 MAEMKLIPGFRFHPTDVELILYFLKRKVLRKKIPFDVIAEVDIYKYPPWDLPAHSLLKNGDLEWYFFCPRGKKYASGARMNRATEGGYWKTTGKDRSIEHKKLVVGMIKTLVFHTGKAPKGDRTDWVMHEFRLEDKNLSDKGIPQDSYVICKVFQKDGPGPRNGAQYGKPFNEEDWDEEEEIGGVESIPDAQSVPIPIQPTTCDSSVVNDRHPSTSEDYFLGMVDYSKDDDTTALNESTVIEEADNPAHANNGDPNNGEVAPYFDPDEIFVDLGDLDSMVVLGEDGHGHGDRNGEYTPNDMLITADDNLWLSDSHDFLELDDLEAPLFWQNQQGK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0590 335 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Aev08g0590 335 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Aev08g0590 335 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Aev08g0590 335 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Aev08g0590 335 PANTHER PLANT NAC DOMAIN PROTEIN 1 216 - -
Aev08g0590 335 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0590 Aev-Chr8 3378586 3381057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0590 1 327 NAC Transcription Factor Family AT5G09330 46.418 8.41e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev08g0590 NAM 4.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0590 - - adu:107470479 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0590 08 3378586 3381057 Aev08g0590 08 3378586 3381057 ECH
Aev03g2909 03 28436224 28459188 Aev08g0590 08 3378586 3381057 PCT