Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0581 ATGGACAGACTCAGAAGCAGCAGCAGCAACAGTAGCAGTGAGACTGATCAGAGTAGAAAGAGTTGCAGTAGGGGCCATTGGAGACCTACGGAAGATGAGAGATTGAAGCAACTTGTGAAGCAATACGGTCCACAAAATTGGAATTTTATTTCAGAACATCTTCAGGGAAGATCAGACACAACAATAATAGGCCACAATAATCCAATGATGATCAATAATAATTCTATCTTGCAAAACAAGGGAATAATCTTTGGTTCATCTACCTCATCATCACATAGATCAGCAACTCCTTTGACTCTAACTAGCAGTGCTGTTCTTGGCAGTTACCAGAGCTTCACTGCACCAGGAATTCCCATTATTGGCAAGACTGTTCCTCTTCCGCGACATGTCTCGGATTCTTCCATCAAAGGCAGCAACATAATGGGCAAACATCCACATCCAAATGCACCATGCAAGTTTCCTATGACTATGAATACTTATGATGAGCAAGAACAAGCTGCTGAATATGATGTTAAACAAAAGAGTGTTCCCTTCATAGACTTTCTTGGAGTGGGAAGTGATAACAGTAACACTCTACTAGGGTACCTTAATTGA 594 0.4125 MDRLRSSSSNSSSETDQSRKSCSRGHWRPTEDERLKQLVKQYGPQNWNFISEHLQGRSDTTIIGHNNPMMINNNSILQNKGIIFGSSTSSSHRSATPLTLTSSAVLGSYQSFTAPGIPIIGKTVPLPRHVSDSSIKGSNIMGKHPHPNAPCKFPMTMNTYDEQEQAAEYDVKQKSVPFIDFLGVGSDNSNTLLGYLN* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0581 197 PANTHER MYB PROTEIN-RELATED 13 58 - -
Aev08g0581 197 Gene3D - 15 67 - -
Aev08g0581 197 CDD SANT 27 59 IPR001005 -
Aev08g0581 197 ProSiteProfiles Myb-like domain profile. 19 59 IPR001005 -
Aev08g0581 197 PANTHER MYB TRANSCRIPTION FACTOR 13 58 - -
Aev08g0581 197 SUPERFAMILY Homeodomain-like 20 70 IPR009057 -
Aev08g0581 197 SMART sant 23 72 IPR001005 -
Aev08g0581 197 MobiDBLite consensus disorder prediction 1 18 - -
Aev08g0581 197 MobiDBLite consensus disorder prediction 1 29 - -
Aev08g0581 197 Pfam Myb-like DNA-binding domain 24 63 IPR001005 -
Aev08g0581 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 59 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0581 Aev-Chr8 3336885 3338015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0581 9 58 MYB Transcription Factor Family AT4G33450 62.000 2.34e-17 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev08g0581 Myb_DNA-binding 2.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0581 K09422 - pop:7466738 84.3445