Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0577 ATGAACGAAGCCCGAATTGAAATCACAATCCCCCACTTGTTCAGATGCCCAATAAGTCTAGATTTGTTCGAAGATCCAGTGACTCTGTGCACAGGACAAACCTATGACAGGTCCAGCATAGAGAAATGGCTTGCTGCAGGTAACCTCACATGCCCTGTCACAATGCAGAAGCTTCATGATCCATCCATTGTTCCTAACACCACTCTTCGGCATTTGATCCATCAGTGGCTTCAACTTGGTCCTCAATTTGACCCTGGTAACTCTGCAACAATCGATTACTTATCTTCCATCAAACACTCCCTTGAATCTCATGATGATCTTGATGAGTTCTCCAATTTTGAGAACAAGCTCCAAGCACTTGAGAAGATCAGAGTCCTCTCTGATGACTACTGTTCTTTCAGGAAGTCTTGTTTCATCCAATTGAGTTTCTTGCCTCTGCTTATTGAGCTGGTTTTTGGAAGATCAGAATCATCAGATTCTGGAATCTCACAGAATCAGATGGAGTTCATAGAGTTAGCACTCTCTTGCATTCTGAAGTTGCTTCCTCTTGTCACTTTGGAGCCTCTAAATATGATCAAAGATGAGTCAAAATTAGCAAACTTTCTTCTATTATTTGAGAAAGGAACAGTCTTGGTTAAGACTAGTTTGTGTCATATTATAGAGTCAACAGCAGAACCAGAGTTACAAGATTTATGTCATGTGCTTGGAAATTCTCAGAAGCTACTGCATGAGATTGTTTTTCTTGCTAGACAAAATAGTGAGGTTTCTAAGGCTGCAATCAAGGCCATGTCAGCATTATGTTCATTGCAATCAAACAGGGAGAGTTTGGTAAAATCAGGAGCAATTGATGGGATCATAAGGTACATTTCAGGCTCTGAAACAAGGCAGAAGAATCTGGCTCCAATGGCAATGGGGATAGTAGAGAAGCTTGTGGGGCTAGACAGTGCTAAAGTCACATTGGTGAATCACCCTAATGGAGTTGAGACTCTGGTGAGGATGGTATTCAGGGTATGTAATCAAGAGTGCAGTGAGAGTGCTGTTGGGATACTTTTGGTTCTTTGCCGTGATTTTGGGACTGCAAGAGAAGGAGCAATTGGGGCTGGGATTTTGACTCAGTTGCTGTTCCTTCTGCAGAGTCAGTGTGGAACAAGAACAAAAACTAAGGCTAGAATGCTGCTCAAATTGCTAAGATCCAAGTGGAATGAATGA 1209 0.4202 MNEARIEITIPHLFRCPISLDLFEDPVTLCTGQTYDRSSIEKWLAAGNLTCPVTMQKLHDPSIVPNTTLRHLIHQWLQLGPQFDPGNSATIDYLSSIKHSLESHDDLDEFSNFENKLQALEKIRVLSDDYCSFRKSCFIQLSFLPLLIELVFGRSESSDSGISQNQMEFIELALSCILKLLPLVTLEPLNMIKDESKLANFLLLFEKGTVLVKTSLCHIIESTAEPELQDLCHVLGNSQKLLHEIVFLARQNSEVSKAAIKAMSALCSLQSNRESLVKSGAIDGIIRYISGSETRQKNLAPMAMGIVEKLVGLDSAKVTLVNHPNGVETLVRMVFRVCNQECSESAVGILLVLCRDFGTAREGAIGAGILTQLLFLLQSQCGTRTKTKARMLLKLLRSKWNE* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0577 402 ProSiteProfiles U-box domain profile. 9 83 IPR003613 GO:0004842|GO:0016567
Aev08g0577 402 PANTHER WDSAM1 PROTEIN 9 399 IPR045185 GO:0061630
Aev08g0577 402 Pfam U-box domain 10 78 IPR003613 GO:0004842|GO:0016567
Aev08g0577 402 Gene3D - 93 398 IPR011989 -
Aev08g0577 402 CDD RING-Ubox_PUB 14 56 IPR045210 -
Aev08g0577 402 SMART Ubox_2 13 76 IPR003613 GO:0004842|GO:0016567
Aev08g0577 402 SUPERFAMILY RING/U-box 5 78 - -
Aev08g0577 402 SUPERFAMILY ARM repeat 250 396 IPR016024 -
Aev08g0577 402 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 80 IPR013083 -
Aev08g0577 402 PANTHER OS02G0542800 PROTEIN 9 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0577 Aev-Chr8 3322096 3323304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0577 8 402 U-box Gene Family AT3G19380 31.719 1.06e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0577 - - gmx:100815247 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0577 08 3322096 3323304 Aev08g0577 08 3322096 3323304 ECH