Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0574 ATGATGATGATGAGAGGTGATGATGGAATTAGCGGCGTGAATAAGCTTCCTCCAGGGTTTCTCTTCTGTCCAAGCGATGAAGAACTCATCCTTCACTTTCTCTATCCTAAGGCCACTTCTTCTCTTCTTCTACCCAACAACAATATCATCCCTGATCTCGATTTCTCTCTCACCGATCCCTGGCAACTAAATGGTAAGGCGTTGTCAAGTGGGAATAATCAATACTATTTCTTCACAAAAGTGAATAACGGTGAATGTGAAAACAGAAGCACGGAAAATGGATATTGGAAGGAAATAGGTGTGGGCGAACCTATAGTGTCAGGCATTGAGAGTAATAAGAAAGTTGGGATGAAGAAGTATCTGGTATTCCACATTGTTGGAGAACAAGGTGGTACTGATCATGAAACCAATTGGGTAATGCAGGAATATCATCATCATCATCATATTTGCTCCTCCTCTGCTGCTGCCTCATCACCACATCAAATTAGTTGCAGCAGATGGGTTCTGTGCAGAGTGTATGAAAAGAACAGCAGCACTAGGTGTCATCATCAACAAGGTGGTTTAACCTCCTGCTCTACATTATTTAGTAGCGATGATCACGAAGACGACGATGATGATGACACTGGAACAGAGCTTTCATGGCTAGACGAAGTTTATCTCTCCTTGGATGATCATATGCAGCAAGAACAAGAACAAGATGAATGCATTATGTATAATTAA 720 0.4153 MMMMRGDDGISGVNKLPPGFLFCPSDEELILHFLYPKATSSLLLPNNNIIPDLDFSLTDPWQLNGKALSSGNNQYYFFTKVNNGECENRSTENGYWKEIGVGEPIVSGIESNKKVGMKKYLVFHIVGEQGGTDHETNWVMQEYHHHHHICSSSAAASSPHQISCSRWVLCRVYEKNSSTRCHHQQGGLTSCSTLFSSDDHEDDDDDDTGTELSWLDEVYLSLDDHMQQEQEQDECIMYN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0574 239 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 229 - -
Aev08g0574 239 PANTHER NAC TRANSCRIPTION FACTOR 56 13 229 - -
Aev08g0574 239 ProSiteProfiles NAC domain profile. 16 175 IPR003441 GO:0003677|GO:0006355
Aev08g0574 239 SUPERFAMILY NAC domain 12 175 IPR036093 GO:0003677|GO:0006355
Aev08g0574 239 Gene3D NAC domain 25 180 IPR036093 GO:0003677|GO:0006355
Aev08g0574 239 Pfam No apical meristem (NAM) protein 17 144 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0574 Aev-Chr8 3303252 3304061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0574 6 180 NAC Transcription Factor Family AT1G61110 40.426 1.47e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev08g0574 NAM 1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0574 - - adu:107470472 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0574 08 3303252 3304061 Aev08g0574 08 3303252 3304061 ECH