Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0573 ATGAAGAAACAAGGGTGTGAGGTTGAGGCAATAGGCATCAACCAGAAGAGGAAGTTGATCGGGAACCGGCCGAAGAAGATATTCAGCAAACCTCCACAACCAAACGGCGAACAAGTTGATCAGGAACCAGCAGAAGAAGCAAGATCATGCAGTGGAGTTAGGCACATTCTGAAGGATGTGAACTTCGTGGCGAAGCCGTGGGAAGTTCTTGCAATTGTCGGGCCGAGTGGTGCTGGAAAATCATCCCTCCTTGAGATTCTTGCAGCTAAGGTTAGTCCACAAAGTGGCTCTATCTTGGTGAACAAGAAGGCTGTAGATAAAGCTATGTTCAGGAAGATTTCAGGGTATGTTACACAAAAGGACACATTGTTTCCCTTACTTACAGTTGAAGAAACATTGATGTTTAGTGCAATGCTGAGGCTAAATCTTCCTCAACAACAAGTATGCTCCAGGGTGAAGTCACTGATTCAGGAACTTGGTCTTAGCCATGTTGCTAGGAGTAGAGTTGGAGATGAGAGGGTTCGCGGAATCTCTGGCGGCGAGAAGCGAAGAGTTTCCATTGGTGTTGAAGTTGTGCATGATCCGAAAGTGCTGATTCTGGATGAACCTACTTCAGGCCTTGACAGTACCAGTGCAATGCAGATAATTGATATGCTTAAAGTCATGGCTGACTCGAGGGGACGAACTATTATCCTAAGTATCCATCAACCTGGGTTCAGAATAGTTAAGATGTTCAATTCAATACTGTTGTTAGCCAATGGTTCTGTGCTGCATCATGGTAGTGTAGATTTGCTGGGTGTGAATCTAAGGTTAGTGGGTCTAGAGCCTCCTCTTCATGTTAATGTAGTTGAGTTTGCCATTGAATCCATTGAGACGATTCAGCAACAGCAAAAATCTCAGCAAGGAATGCAACCAAGGCTGCAGGGGACGCCACAGAAGAGGAAAGGTGGTGATCAAGGTGAGAGTAGAAGTGGTAAGTTTACTCTGCAGCAGCTCTTTCAACAATCCAAGGTAGTTGACGCGGAAAGCATCGATGAGGGAATGGATTTCACTTATGATTTTGTCAATTCTAGATTCAGAGAAACTATGATTCTCAGTCATAGGTTCTTCAAGAACATCCTTCGGACAAAGGAGCTCTTTGCATTTAGGGCAATTCAGATGCTGATTTCTGGGCTGGTTTTGGGTTCCGTCTTCTGTCATCTCAAGGATGGTCTAGAAGGAGCACAAGAAAGGGTTGGCCTGTTTGCTTTCATATTAACATTCTTGCTATCATGCACCACAGAAGCTCTGCCAATTTTCCTTCAAGAAAAGGAGATTCTAATGAAGGAGACATCCAGTGGAAGCTACAGAGTATCATCCTATGCTATTGCCAATGGCATAGTTTTCTTGCCATTTCTACTCATACTAGCCATTTTATTCACACTGCCCCTATATTGGCTTGCTGGTTTAAACAACAATTTCACTGCATTTTTGAACTTTTTGTTGATAATCTGGCTAATTCTATACACGGCAAATTCTGTTGTGGTGTGCTTCAGTGCTTTGGTGCCGAATTTCATTGTTGGGAATTCAGTGATTGCTGGAGTAATCGGTTCATTCTTCTTGTTCTCTGGCTACTTCATATCAAAGCATGAAATTCCCAAGTACTGGATTTTCATGCATTATATATCTCTATACAAGTATCCCTTTGAAGGTTTGCTGATAAATGAGTTCTCCAACTCAAAGAAGTGCTTGGAGTTCATGTTTGGGGCATGTGTGGTGAGGGGAGAAGATATGCTTAAAGAAGAAGGGTATGGGGGTGAGAGCAGTAGATGGAAGAATCTTGCAATGATGGTCGTCTTCATAGTGATTTACAGGTTCTTTTCTTATGTAATTCTGAGATACAGGTGCTCACAGGGTGTCATTATCTAA 1908 0.4292 MKKQGCEVEAIGINQKRKLIGNRPKKIFSKPPQPNGEQVDQEPAEEARSCSGVRHILKDVNFVAKPWEVLAIVGPSGAGKSSLLEILAAKVSPQSGSILVNKKAVDKAMFRKISGYVTQKDTLFPLLTVEETLMFSAMLRLNLPQQQVCSRVKSLIQELGLSHVARSRVGDERVRGISGGEKRRVSIGVEVVHDPKVLILDEPTSGLDSTSAMQIIDMLKVMADSRGRTIILSIHQPGFRIVKMFNSILLLANGSVLHHGSVDLLGVNLRLVGLEPPLHVNVVEFAIESIETIQQQQKSQQGMQPRLQGTPQKRKGGDQGESRSGKFTLQQLFQQSKVVDAESIDEGMDFTYDFVNSRFRETMILSHRFFKNILRTKELFAFRAIQMLISGLVLGSVFCHLKDGLEGAQERVGLFAFILTFLLSCTTEALPIFLQEKEILMKETSSGSYRVSSYAIANGIVFLPFLLILAILFTLPLYWLAGLNNNFTAFLNFLLIIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKHEIPKYWIFMHYISLYKYPFEGLLINEFSNSKKCLEFMFGACVVRGEDMLKEEGYGGESSRWKNLAMMVVFIVIYRFFSYVILRYRCSQGVII* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0573 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 263 IPR027417 -
Aev08g0573 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 627 - -
Aev08g0573 635 MobiDBLite consensus disorder prediction 297 323 - -
Aev08g0573 635 Gene3D - 47 314 IPR027417 -
Aev08g0573 635 Pfam ABC transporter 57 205 IPR003439 GO:0005524
Aev08g0573 635 SMART AAA_5 66 255 IPR003593 -
Aev08g0573 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 39 278 IPR003439 GO:0005524
Aev08g0573 635 Pfam ABC-2 type transporter 362 570 IPR013525 GO:0016020|GO:0140359
Aev08g0573 635 MobiDBLite consensus disorder prediction 22 45 - -
Aev08g0573 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 627 - -
Aev08g0573 635 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0573 Aev-Chr8 3296854 3298761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0573 39 289 Calmodulin-binding Proteins AT2G36910 26.224 1.26e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0573 K05681 - gmx:121172640 962.214