Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0562 ATGTATTCCATTTCCTCAAAGGAGACACAACAAACAGCGAAAATGAACCTTCTTCCCATGAATATCATTCTTCTCATTCTTCACTTACCCTTTTGGGTTCACGCCGCTGCTCTAGACCCTCCTCTTCCCCCACCCATTGCTCCAAATTCCACATCCAATTCCCCTGGAATTCCTGTGGGGGAAGAACATCACAGAAAAGATTCTCACAAGAAAGTGATAATATCTTTAGCCGTATCCACTGCTGCACTTGGTGCTGCCGTCTTGGTTTTGCTATGCTTCTGGATTTATCGAAGAAAGTATCCTTCAAAATCAAATAGGAAGAACAAAAATGTTCAGAGCTCAGATGCAGAGAAAGGGCTCACGTTGGCCACATTTTTCAGTAAATACAGTGCCGTGAAGACGGTGGGTTTGAAGGGGTGTGTTCCAGTAATTGATTTTAAGCAAATAGAGAAAGCAACCAATAATTTTCAAGAAAGTAACATCTTGGGTGAAGGTGGTTTTGGACGTGTTTACAAGGCTCGTTTGGATGATAACCTTGTTGTTGCCGTCAAGAAATTGTACTGTGAAAGTCAAAATGCTGAGAGAGAATTTGAAAACGAGGTGGAATTGTTAAGCAAAATTCAGCATCCAAACATAATTCCTTTGCTGGGTTGTAGCATTAATGGCGACACGAGATTCATAGTCTATGAGTTGATGCAAAATGGATCCTTGGAAGCTCAGTTACATGGACCTTCTCGTGGCTCTGCATTGACTTGGCATATGAGGATGAAGATTGCTCTTGACACTGCAAGAGGATTAGAGTATCTGCATGAGCATTGTTACCCTTCTGTGATCCATAGAGATATGAAATCTTCTAATATCCTTTTAGATGCAAACTTCAATGCCAAGCTTTCTGATTTTGGCCTTGCCATAACTGATGGGTCCCAAAACAAGAAGAACATAAAGCTTTCAGGCACATTGGGGTACGTTGCTCCAGAGTATCTTCTTGATGGGAAATTGACTGATAAAAGTGATGTATATGCATTTGGGGTGGTGCTTTTGGAGCTGCTATTAGGAAGGAAGCCTGTGGAAAAACTGGCACCAGCTCAGTGCCAATCCATTGTCACATGGGCCATGCCACAACTCACTGATAGATCCAAACTTCCAAACATTGTGGATCCAGTTATTAAAGATACAATGGATCTCAAGCACTTATACCAGGTTGCTGCTGTAGCTGTGTTGTGCGTGCAACCAGAACCAAGTTATCGCCCTCTGATCACGGATGTACTGCACTCGCTAATCCCTCTTGTTCCCATTGAGCTTGGAGGAACACTCAGAGTTTCACAAGCGACACAGCATCATCCACCCGTGAATTCCATTTCCTAG 1365 0.4286 MYSISSKETQQTAKMNLLPMNIILLILHLPFWVHAAALDPPLPPPIAPNSTSNSPGIPVGEEHHRKDSHKKVIISLAVSTAALGAAVLVLLCFWIYRRKYPSKSNRKNKNVQSSDAEKGLTLATFFSKYSAVKTVGLKGCVPVIDFKQIEKATNNFQESNILGEGGFGRVYKARLDDNLVVAVKKLYCESQNAEREFENEVELLSKIQHPNIIPLLGCSINGDTRFIVYELMQNGSLEAQLHGPSRGSALTWHMRMKIALDTARGLEYLHEHCYPSVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQNKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKDTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGTLRVSQATQHHPPVNSIS* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0562 454 CDD STKc_IRAK 162 429 - -
Aev08g0562 454 PANTHER BNAA04G14780D PROTEIN 53 447 - -
Aev08g0562 454 SMART serkin_6 156 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0562 454 SUPERFAMILY Protein kinase-like (PK-like) 138 426 IPR011009 -
Aev08g0562 454 ProSitePatterns Protein kinases ATP-binding region signature. 162 185 IPR017441 GO:0005524
Aev08g0562 454 Gene3D Phosphorylase Kinase; domain 1 119 231 - -
Aev08g0562 454 PANTHER OS01G0750732 PROTEIN 53 447 - -
Aev08g0562 454 Gene3D Transferase(Phosphotransferase) domain 1 232 431 - -
Aev08g0562 454 Pfam Protein kinase domain 156 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0562 454 ProSiteProfiles Protein kinase domain profile. 156 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0562 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0562 Aev-Chr8 3225769 3228710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0562 33 372 Receptor kinase-like Gene Family AT1G80640 49.419 9.21e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Aev08g0562 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0562 - - ahf:112784689 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0562 08 3225769 3228710 Aev08g0562 08 3225769 3228710 ECH
Aev07g1210 07 10698691 10708034 Aev08g0562 08 3225769 3228710 PCT