Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev08g0561 | ATGAAAAAGAAGGGAAGAGCAGAAAATCCCCTGTGTGGGACCCAATGTGCTTCAAAATGGATGCCAGATGAGATAGAGGCAGCCCCCAACTACATAAACCCATTCACCCCTTCTTCTTCAATCCTACTTCACTTGGTACCACAACTCTCCCTATCACATTCACACCACTCAAAACAGAACATTGTCTCTGTGAAACCCAACAACATACACAGTTTTCCTAACATGGCCAGACCACAACAGCGATACCGAGGCGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCCATTTTGAAAACTAGGATATGGCTTGGTACTTTTGAAACAGCAGAGGATGCTGCAAGAGCGTACGATGAAGCAGCGAGGCTAATGTGTGGGACGAGGGCGAGAACCAACTTCCCTTACAACCCCAATGCGTCACAGTCATCATCCTCGAAGCTTCTCTCTGCAACTTTGACTGCTAAACTCCACAGATGCTATATGGCATCGTTGCAGATCACTCGCCCTTCGTTGCCGCCACTGCCCAATGCTGTTATCCCCACAACCAGCAGCAATAACAGTAACTCATCTGTGACGACCATTGAAAGCACTGATCATGCAATGTTGCCTCCGCACAAGAGAGAAAGGGAAGAGCAAGAACAAGAGTATTCCGATGGGAATTGGGTTCTTAAGAAGGTTAAAGTGGAAAGTGGTCTTCATCATCATCATCAGCAACAGCAGCAGCAGATTTTCGAGCCTCTGGAAGAGGATCACATTGAGCAAATGATTGAAGAGTTACTTCATTATGGCTCTATTGAGCTCTGCTCTGTCATTCCTCCTCGGCCTCATTGA | 843 | 0.4745 | MKKKGRAENPLCGTQCASKWMPDEIEAAPNYINPFTPSSSILLHLVPQLSLSHSHHSKQNIVSVKPNNIHSFPNMARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQITRPSLPPLPNAVIPTTSSNNSNSSVTTIESTDHAMLPPHKREREEQEQEYSDGNWVLKKVKVESGLHHHHQQQQQQIFEPLEEDHIEQMIEELLHYGSIELCSVIPPRPH* | 281 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev08g0561 | 280 | ProSiteProfiles | AP2/ERF domain profile. | 81 | 138 | IPR001471 | GO:0003700|GO:0006355 | |
Aev08g0561 | 280 | SUPERFAMILY | DNA-binding domain | 81 | 140 | IPR016177 | GO:0003677 | |
Aev08g0561 | 280 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 75 | 275 | - | - | |
Aev08g0561 | 280 | PRINTS | Ethylene responsive element binding protein signature | 104 | 120 | IPR001471 | GO:0003700|GO:0006355 | |
Aev08g0561 | 280 | PRINTS | Ethylene responsive element binding protein signature | 82 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Aev08g0561 | 280 | CDD | AP2 | 80 | 140 | IPR001471 | GO:0003700|GO:0006355 | |
Aev08g0561 | 280 | Pfam | AP2 domain | 81 | 130 | IPR001471 | GO:0003700|GO:0006355 | |
Aev08g0561 | 280 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE | 75 | 275 | - | - | |
Aev08g0561 | 280 | SMART | rav1_2 | 81 | 144 | IPR001471 | GO:0003700|GO:0006355 | |
Aev08g0561 | 280 | Gene3D | AP2/ERF domain | 80 | 139 | IPR036955 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev08g0561 | Aev-Chr8 | 3213676 | 3214625 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev08g0561 | 75 | 276 | AP2-EREBP Transcription Factor Family | AT5G25190 | 63.366 | 7.29e-79 | 235 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Aev08g0561 | AP2 | 1.2e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev08g0561 | - | - | gmx:100804510 | 267.7 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev08g0561 | 08 | 3213676 | 3214625 | Aev08g0561 | 08 | 3213676 | 3214625 | ECH |