Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0561 ATGAAAAAGAAGGGAAGAGCAGAAAATCCCCTGTGTGGGACCCAATGTGCTTCAAAATGGATGCCAGATGAGATAGAGGCAGCCCCCAACTACATAAACCCATTCACCCCTTCTTCTTCAATCCTACTTCACTTGGTACCACAACTCTCCCTATCACATTCACACCACTCAAAACAGAACATTGTCTCTGTGAAACCCAACAACATACACAGTTTTCCTAACATGGCCAGACCACAACAGCGATACCGAGGCGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCCATTTTGAAAACTAGGATATGGCTTGGTACTTTTGAAACAGCAGAGGATGCTGCAAGAGCGTACGATGAAGCAGCGAGGCTAATGTGTGGGACGAGGGCGAGAACCAACTTCCCTTACAACCCCAATGCGTCACAGTCATCATCCTCGAAGCTTCTCTCTGCAACTTTGACTGCTAAACTCCACAGATGCTATATGGCATCGTTGCAGATCACTCGCCCTTCGTTGCCGCCACTGCCCAATGCTGTTATCCCCACAACCAGCAGCAATAACAGTAACTCATCTGTGACGACCATTGAAAGCACTGATCATGCAATGTTGCCTCCGCACAAGAGAGAAAGGGAAGAGCAAGAACAAGAGTATTCCGATGGGAATTGGGTTCTTAAGAAGGTTAAAGTGGAAAGTGGTCTTCATCATCATCATCAGCAACAGCAGCAGCAGATTTTCGAGCCTCTGGAAGAGGATCACATTGAGCAAATGATTGAAGAGTTACTTCATTATGGCTCTATTGAGCTCTGCTCTGTCATTCCTCCTCGGCCTCATTGA 843 0.4745 MKKKGRAENPLCGTQCASKWMPDEIEAAPNYINPFTPSSSILLHLVPQLSLSHSHHSKQNIVSVKPNNIHSFPNMARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQITRPSLPPLPNAVIPTTSSNNSNSSVTTIESTDHAMLPPHKREREEQEQEYSDGNWVLKKVKVESGLHHHHQQQQQQIFEPLEEDHIEQMIEELLHYGSIELCSVIPPRPH* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0561 280 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
Aev08g0561 280 SUPERFAMILY DNA-binding domain 81 140 IPR016177 GO:0003677
Aev08g0561 280 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 75 275 - -
Aev08g0561 280 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Aev08g0561 280 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Aev08g0561 280 CDD AP2 80 140 IPR001471 GO:0003700|GO:0006355
Aev08g0561 280 Pfam AP2 domain 81 130 IPR001471 GO:0003700|GO:0006355
Aev08g0561 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE 75 275 - -
Aev08g0561 280 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Aev08g0561 280 Gene3D AP2/ERF domain 80 139 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0561 Aev-Chr8 3213676 3214625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0561 75 276 AP2-EREBP Transcription Factor Family AT5G25190 63.366 7.29e-79 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev08g0561 AP2 1.2e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0561 - - gmx:100804510 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0561 08 3213676 3214625 Aev08g0561 08 3213676 3214625 ECH