Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0558 ATGGAAATTACACACACCCTCTCTGCTAGAGATCATCATCATCATCATCATGCTCCTCCAAGTCCAAGTACCCCATTGCAGAATCCACAAGAAAAGAAGCAAGAAACAATTGATCATGAAGAAGAGGAAGAAGAGGAGGAAAAGGTTGAACCTTTATTGGATCTGAATACCCCTGGTGCTGACTCCTCCTCACTTGGGTGTAGCACAGAACTCAACCTCAGAACACGTAGTCTGGACATGGATTCAGCCAAGACATCATCAGAAAACACTGCTAGTACCCCTCCTGCTGGTTGTGATACAGAGCCAAGAGTTTTCTCTTGCAACTACTGCCAGAGGAAATTCTATAGTTCTCAAGCACTTGGTGGGCACCAAAATGCTCACAAGAGAGAAAGGTCAATTGCAAAAAGAGGACAAAGGTTAGGATCACACATGATGATGAACTCTGCATCAGCATCATCAGTAGCATTTGGAATCCCTTTTGTTCATCATCAGCACCTTAACCGCTATCCAAGCATTGCATCTCTGCCCCTCCATGGTGCTTCTTACAGGCCACTTGGAATTCAACCACACTCAATCATTCATAAGCCCTTTTCATCAAATGGCTTTGGAGGCCGTGGCTGGTCAAGACCACCCCTTATTGCTCAACAACCTGGAATTGGAAAACTTACTATGCCAACTTTCCACAGATCAAGAGGTAGTACTAGTAGTAGTAATAGTAGTGTTGGTAGATTCGAAGCTGTGAAGAACGTGCTCAGTAATCAAGAGGAAATGAAGCACCTTGATTTATCTCTAAAGCTCTGA 801 0.4395 MEITHTLSARDHHHHHHAPPSPSTPLQNPQEKKQETIDHEEEEEEEEKVEPLLDLNTPGADSSSLGCSTELNLRTRSLDMDSAKTSSENTASTPPAGCDTEPRVFSCNYCQRKFYSSQALGGHQNAHKRERSIAKRGQRLGSHMMMNSASASSVAFGIPFVHHQHLNRYPSIASLPLHGASYRPLGIQPHSIIHKPFSSNGFGGRGWSRPPLIAQQPGIGKLTMPTFHRSRGSTSSSNSSVGRFEAVKNVLSNQEEMKHLDLSLKL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0558 266 MobiDBLite consensus disorder prediction 1 67 - -
Aev08g0558 266 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 13 266 IPR044246 GO:0009788
Aev08g0558 266 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 13 266 - -
Aev08g0558 266 SUPERFAMILY beta-beta-alpha zinc fingers 101 133 IPR036236 -
Aev08g0558 266 ProSitePatterns Zinc finger C2H2 type domain signature. 107 127 IPR013087 -
Aev08g0558 266 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 132 IPR013087 -
Aev08g0558 266 Gene3D Classic Zinc Finger 81 155 - -
Aev08g0558 266 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0558 Aev-Chr8 3186625 3187425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0558 21 266 C2H2 Transcription Factor Family AT5G10970 39.568 3.94e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0558 - - gmx:100819663 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0558 08 3186625 3187425 Aev08g0558 08 3186625 3187425 ECH
Aev07g1217 07 10756470 10757339 Aev08g0558 08 3186625 3187425 PCT