Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0557 ATGACTATGGAGAACGGGGTGGATGATACCGGTGATCAGTTTCCCAAAGGAATGCGTGTTCTTGCAGTTGATGATGACCCCACATGCCTCTTGGTTCTGGAAACTTTGCTGAGGAGATGTCAATATCACGTTACCACAACTAGTCAAGCAATAAAGGCATTGAAACTGTTGAGAGAAAACAAGTTTGACCTGGTAATCAGTGATGTCCACATGCCAGACATGGATGGATTTAAGCTCCTTGAGCTTGTGGGACTTGAGATGGACCTACCTGTCATAATGTTGTCTGCAAATGGCGATACAAAATTGGTGATGAAAGGGATTTCTCACGGAGCTTGCGATTATCTGCTGAAACCTGTGAGAATTGAAGAGCTAAAGAACATTTGGCAGCACGTTATCAGGAGGAAGAAGTTTGATCCAAAGGAGAAGAACAAAACCAGGAACCCAGACAAACCTACTTCTGATAGTGTTAACGTGCTAGGCTCAGCAGGAACAGGAGGAAACTCGGATATAAATGGGAAGCTGAATAAAAAAAGGAAGGATCAGGATGATGAAGAAGATGAGGAGCAAGATAATGGTCACGAAAATGAGGATCCGTCAGCCCAGAAGAAGCCTCGGGTTGTTTGGTCAGTGGAGCTTCACCGCAAGTTTGTTGCAGCTGTTAATCAGTTAGGCATTGACAAGGCTGTGCCTAAAAAAATTCTTGATTTGATGAATGTTGACAAGCTGACGAGGGAGAATGTGGCAAGCCATCTACAGAAATATAGGCTTTATCTGAAGAGGATTAGCTGCGTGGCGAACCAACAGGCAAATATGGTGGCCGCCCTTGGGGGTGCAGATCCATCCTATATGAGAATGGGTTCAATGAGTGGTATTGGACATTTGCCACCATTGAGTGGTTCTGGACAATTTCCTACCAACACTTTCAGGTCCTTTCCACCTAGTGGGATGATTGGTAGATTGAACACTCCTGCTGGACTCAACGTCCATGGATTTCCGTCTTCTGGAGTATTTCAGTTGGGTCAATCGCCAAATTTAAACAACTCTACCACCGAACAGCTCAAGTTTCAGTCATCAATAGTTCCTGTTAATCAGAATGGTGTTCAGGGAATGCAGGTGCCTATGGGGCTTGATCCATTGCAACATAATAAAGGTATTATTCCTGTCCAAAACCTTACCACCGGTATTGATGCTAAACCAAATTTGCCCATCTCGAATAAACTCCCTGATCCGAGATCCAGAGTAGCCTCCTCTGTCTCACACACTCCTCTTCTTGGTATCTCAAACAAAAATCCCTTGATGTTGGAAGCACGCCCACAAGACTCACAAGGGGTTATAGAATATGAAAATTCTACTTCATCATCAGTACCCTCTCAACATTCAGAATTTCCTTTCCCTTCGCTGGATCAATGTAGGTATAGTGATAATTGGTCAAGTGCTGTTCAGCCATCTGGGATCCGCACGAATTCTTACTCTCCGAGCGAATGTTTTAGACAGACAGCTATACCTACGACAGGTAATGTGGCTTCTTTACCGTTGCAAGAGGGGAATCTGAGTCTTCCTTCGTCCATCTCTTCACTGCCCAGTCAATATTCTCAAAGTTCAATGACAGATATGCACTCCCAAGGTGTGCTGTTTACTAATAGACCTGGTCATATTAGCGACGATGCGCAATTTCAAGCGTGGGATGACCATAACCATGATGCTAGTTACCATTCAAATGTTATCAGTAGCACAATAAACTCTGCGATTCCAGTTAGCGGCGCTGTTGGTTCAGCAAATCATACACCAACAAACTCAAACTTGCACCAAAACTTGGACTATAAATTCAGCGATCCCTTACAAATGAAGCAAGATGGGGTGGTGAAGTTAACTAAGGAGACCTCACTGAAACCGCATCTGGGGAATGTCATGAACCAGCAGAGGTCTCAACATAGTCACTTCTCGAACAATGTCGGCTCACTGGAAGACTTGGTCAGTTCAATGATGAAACAGGAGCAAGACGAGACGAAATTGCTGGACGGAGACTTCATTTGCCATAGCTATTCTGGTGGCATATCAATGTGA 2064 0.4428 MTMENGVDDTGDQFPKGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTSQAIKALKLLRENKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGISHGACDYLLKPVRIEELKNIWQHVIRRKKFDPKEKNKTRNPDKPTSDSVNVLGSAGTGGNSDINGKLNKKRKDQDDEEDEEQDNGHENEDPSAQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVDKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGGADPSYMRMGSMSGIGHLPPLSGSGQFPTNTFRSFPPSGMIGRLNTPAGLNVHGFPSSGVFQLGQSPNLNNSTTEQLKFQSSIVPVNQNGVQGMQVPMGLDPLQHNKGIIPVQNLTTGIDAKPNLPISNKLPDPRSRVASSVSHTPLLGISNKNPLMLEARPQDSQGVIEYENSTSSSVPSQHSEFPFPSLDQCRYSDNWSSAVQPSGIRTNSYSPSECFRQTAIPTTGNVASLPLQEGNLSLPSSISSLPSQYSQSSMTDMHSQGVLFTNRPGHISDDAQFQAWDDHNHDASYHSNVISSTINSAIPVSGAVGSANHTPTNSNLHQNLDYKFSDPLQMKQDGVVKLTKETSLKPHLGNVMNQQRSQHSHFSNNVGSLEDLVSSMMKQEQDETKLLDGDFICHSYSGGISM* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0557 687 Gene3D - 18 156 - -
Aev08g0557 687 Gene3D - 199 262 - -
Aev08g0557 687 SMART REC_2 18 128 IPR001789 GO:0000160
Aev08g0557 687 SUPERFAMILY Homeodomain-like 201 260 IPR009057 -
Aev08g0557 687 CDD REC_typeB_ARR-like 20 132 - -
Aev08g0557 687 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 259 IPR017930 -
Aev08g0557 687 PIRSF RR_ARR_type-B 1 684 IPR017053 GO:0003677|GO:0003700|GO:0009736
Aev08g0557 687 Pfam Response regulator receiver domain 20 126 IPR001789 GO:0000160
Aev08g0557 687 MobiDBLite consensus disorder prediction 150 171 - -
Aev08g0557 687 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Aev08g0557 687 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 1 662 - -
Aev08g0557 687 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 662 IPR045279 GO:0009736
Aev08g0557 687 SUPERFAMILY CheY-like 16 138 IPR011006 -
Aev08g0557 687 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 203 256 IPR006447 GO:0003677
Aev08g0557 687 Pfam Myb-like DNA-binding domain 205 255 IPR001005 -
Aev08g0557 687 MobiDBLite consensus disorder prediction 138 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0557 Aev-Chr8 3175967 3179157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0557 1 439 Response Regulator Gene Family AT2G25180 54.120 5.06e-133 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Aev08g0557 Response_reg 1.8e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0557 - K14491 gmx:100809002 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0557 08 3175967 3179157 Aev08g0557 08 3175967 3179157 ECH