Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0553 ATGGCAAAGTGTCAACGAAACGACGTCGGATCTGTCGTTCTCGACCACCGCCAAACTACCAAGAATGTCGCAGGCGGTGGCCACTTCCGTCTCTGGAACTCCTTCTCCGCCACCTCATTTCGTCGTATTGTCCTCGAAGCCGTCAGCTGCGGCGGCGGAACCTCTCGCTACCGCTACCAGCAGCGCCACCGTGACGATGACGACGAAGGATTTAGCTCGTCCGCTGCATCAACGGCGGCGAGTTTGGCTTCCGGTAGCCGGAGGGAGAAGGAGCAACAGCAGCATGAGGAGAGGACGACGGAGAAGCTCTCGGATCTGCTGAACATTGCGGAGTTCGAGACGGATGCGGAGGCGAAGAAGAAGGAAGAGGCATTGGTGGAGCTGAAGAGTGTGGTGAAGGATTTGCAGGGAGAGGACTCCGCGAAGCGACTAGCGGCGGCAACGAGAGTGAGGTCGCTGGCGAAGGAAGGATCGGAAGCGAGGGGAACTCTGGCGATGCTCGGAGCCATTCCACCGCTCGTCGGAATGCTCGATTCGGAAGAAGACGTTCATTCTCAGATCGCTTCTCTCTACGCATTGCTCAATCTCGGGATCGGCAACGATGCAAACAGAGCAGCGATTGTCAAAGTTGGTGCTGTTCACAAGATGCTGAAGCTCATTGAATTGCCCGGTGCTACGGATTCATCGGTTTCCGAAGCAATTGTTGCTAATTTCCTTGGATTGAGTGCTTTGGATTCGAACAAACCAATAATTGGATCCTCCGGTGCAATTCCCTTCCTAGTTAGAAGCCTAAAAGAGTTCCATTGTAAGTGTAGCAAACAAGCCAAGCAAGATGCTCTTCGAGCTCTGTACAACCTATCAATCTTTCAAGCCAACATTTCGTTGATTTTGGAAACTGATTTGGTCCCGTTTCTGATAAATGCAATTGAAGACATGGAAGTGAGTGAAAGGGTGCTTTCAGTCCTGAGCAATTTGGTGTCAACCCCAGAAGGTAGAAAAGCTATAAGTGGTGTAAAGGATGCCATCCCAATTCTGGTTGATGTATTGAATTGGTCAGATTCACCGGCGTGCCAAGAGAAGGTGTCGTACATTTTGATGATCATGGCACACAAAGTCTATGGTGACAGGCAAGCCATGATTGAGGCAGGGATAGTGTCATCACTGCTTGAATTGACCCTTTTGGGTTCCACATTGGCACAGAAAAGGGCCTCAAGGATATTGCAGTGTTTGAGGGTAGACAAAGGGAAGCAGGTTTCTGGGAGCTACGGTGGTAACTTGGGAGCCAATGTATCTGCACCTATTTATGGCTCTTCATCATCATTTGCGAAGGCGGCGAGTGGTGGAGGTAAAGAGAATTTGGAGGAGGAGGAAGATATGATGAGTGAAGAGAAGAAAGCAGTGAAGCAATTAGTTCAGCAGAGTTTGCAAAACAACATGAGGAAAATTGTCAAGAGAGCTAACTTGCGTCAAGATTTTGTTCCATCTGAGCATTTTACTTCGCTCACTTCAAGTTCAACTTCGAAGAGCTTGCCATTTTGA 1539 0.4951 MAKCQRNDVGSVVLDHRQTTKNVAGGGHFRLWNSFSATSFRRIVLEAVSCGGGTSRYRYQQRHRDDDDEGFSSSAASTAASLASGSRREKEQQQHEERTTEKLSDLLNIAEFETDAEAKKKEEALVELKSVVKDLQGEDSAKRLAAATRVRSLAKEGSEARGTLAMLGAIPPLVGMLDSEEDVHSQIASLYALLNLGIGNDANRAAIVKVGAVHKMLKLIELPGATDSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRSLKEFHCKCSKQAKQDALRALYNLSIFQANISLILETDLVPFLINAIEDMEVSERVLSVLSNLVSTPEGRKAISGVKDAIPILVDVLNWSDSPACQEKVSYILMIMAHKVYGDRQAMIEAGIVSSLLELTLLGSTLAQKRASRILQCLRVDKGKQVSGSYGGNLGANVSAPIYGSSSSFAKAASGGGKENLEEEEDMMSEEKKAVKQLVQQSLQNNMRKIVKRANLRQDFVPSEHFTSLTSSSTSKSLPF* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0553 512 Coils Coil 450 473 - -
Aev08g0553 512 Gene3D - 108 268 IPR011989 -
Aev08g0553 512 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 512 - -
Aev08g0553 512 MobiDBLite consensus disorder prediction 72 87 - -
Aev08g0553 512 Coils Coil 118 138 - -
Aev08g0553 512 Gene3D - 269 421 IPR011989 -
Aev08g0553 512 SMART arm_5 244 288 IPR000225 GO:0005515
Aev08g0553 512 SMART arm_5 157 198 IPR000225 GO:0005515
Aev08g0553 512 SMART arm_5 289 327 IPR000225 GO:0005515
Aev08g0553 512 SMART arm_5 328 370 IPR000225 GO:0005515
Aev08g0553 512 SMART arm_5 200 243 IPR000225 GO:0005515
Aev08g0553 512 MobiDBLite consensus disorder prediction 62 102 - -
Aev08g0553 512 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 512 - -
Aev08g0553 512 SUPERFAMILY ARM repeat 127 411 IPR016024 -
Aev08g0553 512 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0553 Aev-Chr8 3138561 3140354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0553 115 420 U-box Gene Family AT2G28830 34.185 7.44e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0553 - - zju:107422474 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0553 08 3138561 3140354 Aev08g0553 08 3138561 3140354 ECH
Aev07g1380 07 12679883 12682146 Aev08g0553 08 3138561 3140354 PCT