Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0550 ATGGATATAACAACGTGCGTGGATACTTCTCTCAATCTCAACCTTGTTCCTCCCAGCAACCACATCGACCACGTTGCGGCTGAGGTATTGGTTGAGGAGTTGCATCGATTGAGCAGTGAGAACAAGAAGCTGACGGAGACACTGAAGCAGGTGTGTGACGACTATGTTGCTCTGAAGAAGCATTTGAGCGAGTTCAGCATAAACAAACAGCACATGCCAAATAATTTTGAGAAGGAAGAATTAATAATAGCATCAACAACACCGTCGTCGTCGTCGTTGAAGAGAAAGGCTGAGAGTGAGATGATGAGCAACAAGTTTGGCGTGACGACTGAGTGCAGTACCACTACGGCCGATAATAATGAAGTAACACTATTCAAAAGGCCCTCCAGGCATGACGCTTCCCCTAAGGTTTCCAAGATTATTGTACGCACTGATGCATCTGATACTACCAGCCTTTATGTTCGGGATGGATATCAGTGGAGAAAATACGGGCAGAAAGTGACGAGAGATAACCCCTCTCCTAGGGCTTACTTCAGGTGCTCCTTTGCCCCAAATTGCCCAGTCAAGAAGAAGGTGCAAAGAAGTGCAGAGGATCCAACATTATTGGTGGCAACATACGAAGGAGAGCACAACCATCATGCGCATCACAACGCAGCAGAAATATCACTCATGAGCTGCAGCAGCAGTAGTACTGTTACTTGTTCTTCACCAGCAACGCAGAGTAGTAGTGAAAGCCCTAGTCTGATGAATGGGATCATTGCTGGTGCTACTCCTCCAACAACAACTGTAACGGCTGACTTGGTCAAGTCAGGGTTAGTTGCGCAAAAGTCTTCATCATCTATTATTACGCACCAGCAGCAGCAGCAGCAGTTTCTAGTTCACCAGATGGCAACTTCTTTGACTCAAGATCCCAATTTTACTGCCGCTCTTGCCACCGCCATTTCAGGAACTATCCTTGACCACGCCTCCATCGTCAAAACCCGGTGA 987 0.4701 MDITTCVDTSLNLNLVPPSNHIDHVAAEVLVEELHRLSSENKKLTETLKQVCDDYVALKKHLSEFSINKQHMPNNFEKEELIIASTTPSSSSLKRKAESEMMSNKFGVTTECSTTTADNNEVTLFKRPSRHDASPKVSKIIVRTDASDTTSLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSFAPNCPVKKKVQRSAEDPTLLVATYEGEHNHHAHHNAAEISLMSCSSSSTVTCSSPATQSSSESPSLMNGIIAGATPPTTTVTADLVKSGLVAQKSSSSIITHQQQQQQFLVHQMATSLTQDPNFTAALATAISGTILDHASIVKTR* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0550 328 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g0550 328 ProSiteProfiles WRKY domain profile. 149 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev08g0550 328 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 4 320 IPR044810 GO:0003700
Aev08g0550 328 Gene3D WRKY domain 137 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev08g0550 328 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 4 320 - -
Aev08g0550 328 SUPERFAMILY WRKY DNA-binding domain 151 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev08g0550 328 Coils Coil 27 54 - -
Aev08g0550 328 SMART WRKY_cls 154 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0550 Aev-Chr8 3103029 3104721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0550 4 318 WRKY Transcription Factor Family AT1G80840 42.947 5.40e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev08g0550 WRKY 4.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0550 - - gmx:100127373 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0550 08 3103029 3104721 Aev08g0550 08 3103029 3104721 ECH
Aev07g1347 07 12190663 12193655 Aev08g0550 08 3103029 3104721 PCT