Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0531 ATGGCTTCCAAGCTCTGTGATTCTTGCAAGTCCGCCACCGCTACTCTCTACTGCCGCCCTGACTCCGCCTTCCTCTGCTCCCCCTGCGATTCAAAGGTCCACGCCGCCAACAAGCTCGCTTCCCGCCACCCTCGCGTTACTCTCTGCGAGGTTTGTGAGCAGGCACCTGCTCACGTCACCTGCAAGGCTGACGCTGCTTCTCTCTGCCTCGCTTGTGATCGCGACATCCACTCTGCCAACCCCCTCGCCAGCCGCCACGAGCGCCAACCGGTTGTTCCTTTCTACCACTCCATCGACGCCGTTAAGTCTCCGGTTAACTTCCTTGACGAAGATAATCGATTTTTCTCAGATGCAGATGCTGACGCTGATGTTGACGTCAGCACGGAGGAGGCCGAGGCTGCTTCCTGGCTGCTTCCTACTCCTTCAAACCCTACCAAGGCGGATCTGAACTCGTCTCAGTACTTGTTCCCTGAGATTGAAACGGTGCCGTATGTAGATCTGGATTATGGCGTTGTGGATCCGAAATCGGAGCAGAAGAGCTCCGCCACCGCCGACGGTGTTGTTCCGGTGCAGAGCAAGACTGCCGTGAACGAGCACTACTTCGAGCCTTTCGCGTACGGTGGTTACAAGTACAGCACGCAGTCACAGTCTCAGTCACAGATGAGCCACAGCATGTCGTCGTCGTCGATGGAAGTTGGAGTCGTGCCGGACGCGAACGCGATGTCGGAGATATCGAACTGCCAGGTAGCTGCGGCGATGGAGGGAGGCAACCAGTCGGTGACGGTGGTGGCGCAGTTCTCGGCGGCCGATAGGGAAGCTAGGGTTTTGAGGTACAGAGAAAAGAGGAAGAACAGAAAATTCGAGAAGACCATACGATATGCTTCGCGCAAAGCATACGCTGAAACAAGGCCAAGGATCAAAGGAAGGTTCGCCAAACGCTCTGAAGTCGTCGACCCTCTCAACGGATACGGCGTCGTTCCGTCGTGTTAA 990 0.5636 MASKLCDSCKSATATLYCRPDSAFLCSPCDSKVHAANKLASRHPRVTLCEVCEQAPAHVTCKADAASLCLACDRDIHSANPLASRHERQPVVPFYHSIDAVKSPVNFLDEDNRFFSDADADADVDVSTEEAEAASWLLPTPSNPTKADLNSSQYLFPEIETVPYVDLDYGVVDPKSEQKSSATADGVVPVQSKTAVNEHYFEPFAYGGYKYSTQSQSQSQMSHSMSSSSMEVGVVPDANAMSEISNCQVAAAMEGGNQSVTVVAQFSAADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEVVDPLNGYGVVPSC* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0531 329 SMART bboxneu5 1 48 IPR000315 GO:0008270
Aev08g0531 329 SMART bboxneu5 49 91 IPR000315 GO:0008270
Aev08g0531 329 Pfam B-box zinc finger 46 91 IPR000315 GO:0008270
Aev08g0531 329 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Aev08g0531 329 ProSiteProfiles CCT domain profile. 271 313 IPR010402 GO:0005515
Aev08g0531 329 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 2 328 - -
Aev08g0531 329 CDD Bbox1_BBX-like 5 48 - -
Aev08g0531 329 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Aev08g0531 329 Pfam CCT motif 271 313 IPR010402 GO:0005515
Aev08g0531 329 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Aev08g0531 329 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 2 328 IPR045281 GO:0009909
Aev08g0531 329 CDD Bbox1_BBX-like 48 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0531 Aev-Chr8 3015315 3016407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0531 1 328 C2C2-CO-like Transcription Factor Family AT5G24930 55.858 1.41e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Aev08g0531 zf-B_box 9.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0531 - - gmx:100794431 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0531 08 3015315 3016407 Aev08g0531 08 3015315 3016407 ECH