Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0527 ATGGCGAAACAATATTATTGTTATGATTGTAGCAACAAATTAGTGGGTGGTGTAATAATGAGTGTATGGTTGTTGTTATTGGGTGCGTCGTGGGCACAAAGAAACAACAATAATACAGCAGTGGGTGCAGGAGGAGCAGTGAGGAGAGTGAAAGTAGGAGCGGTGGTAGATCTAGGAACTGCAAGTAGGGTTGGGAGGATGGGGTTAAGCTGCATCAGAATGTGCCTCTCTGAATTCTACGGCTCCCATCCTCACTACAAAACCAGGCTCCACCTCATCACCAGGGACTCCCAAACACACGTTCTCACTGCTGCTTCTCAAGCACTAGATCTCATAAAGAATGAGCAAGTGGAAGCTATATTGGGGCCAGTGACAACAATGGAAGCAACATTTATGATCAGCCTCGGAGACAAAGCACACGTGCCCATTGTAACATTCTCAGCCACAAGCCCTTCTCTTTCTTCTCTTCGGAGTCCATATTTTTTCCAAGTTGCTCAAAACGATTCAACTCAAGTCAAAGCCATTAGTGCCCTCGTCCAAGCATTTGGGTGGAAAGAGGTTGTTCCCATCTATGTTGACAACAGTTATGGCGAAGGAGTGATTCCATGCTTAACCAATTCTCTCCAACAGGCCTATGTTCGTGTCCCTTATCTCAGTGTTCTTCCTCTTTCAGCCTCTGATGAAGCTATCTCTGAAGAGCTCTTTAAGTTAATGACAATGCAAACGAGAGTGTTTGTTGTGCACATGACACCGGGTCTTGGGTCTCGTGTGTTTAGCATTGCAAACAAAATTGGGATGATGGGTCAGGGCTATGTGTGGATTGTGACTAATGGAATGGCCAATTTCTTCAATTCTTTGGATTCCTCTGTCATGGAATCCATGGAAGGGGTTTTGGGTGTTAGGCCTTATGTTCCAAGAACAAAAGTGCTTGATGATTTTAAGGTTCGATGGAGAAGAGAATTCTTAAAGGAGAATCCAACACTTGTTGATACAAATTTGAATGTTTTTGGGGTGTGGGCCTATGATGCTGCAACTGCATTGGCAATGGCTGTTGAGAAGGTTGGTATTACCAATTTTGGCTTCTCCAATGTTAGCAGCAACACATCATCAAGCATTGTGCCTGATCTTGAGAACTTTGGGATTTCACAAAATGGTGAGAAGCTGAGTGAAGCTCTGTCAAACACTAGATTCAAAGGACTGAGTGGTGAGTTCAGCGTTGTTGGAGGGTCTTTACAAGGATCAACACTTGAGATAGTTAATGTGGTTGGTAATGGGGAAAAAAGAATAGGGTTTTGGAGCCCAGAGAAGGGACTAATTAGAAATTTGGATACAAAAAGTGGAACCACATATAATACTTCTAAGAGCAATTTGGGGCCTATTATATGGCCAGGGGACACTTACTCTGTTCCAAAGGGTTGGGAAATTCCCACCAATGGCAGGAAGTTGAGGGTAGGGGTTCCAGTGAAAGATGGGAGTGGTTATACTGAATTTGTGAAGATAAGCTATGATCCTAGTACAAATTCAACACAGGTCGATGGATTCTGCATTGATGTCTTTAAAGCTGTGCTGAAAGAGTTGCCTTATGCACTTCCATATGAATTCATCCCTTTTGAAAAGCCTAATGGTGAAATGGCAGGAACATATGATGAGTTGGTCAGCCAAGTTTATTTTGGGAACTATGATGCTGTGGTGGGGGACGTAACAATTATTGCAAACAGAACCAACTACATTGATTTCACATTGCCATACACAGAATCTGGTGTGACTATGGTTGTTCCAGTAAGGGACAACAGGAAGAAGAATGCATGGGCCTTTTTGAAGCCACTGACATGGGATCTTTGGGTAACATGTGCTTGTTCCTTTGTGTTCATTGGATTTGTTGTGTGGGTCCTTGAACACAGAATCAACAACCATTTCAGAGGTCCTCCTTCTCACCAAATTGGCACAAGCTTGTGGTTTTCCTTCTCCACCATGGTCTTTGCCCACAGGGAGAAAGTGGTGAGTAACTCGGGTAGATTTGTGGTGATTGTGTGGGTTTTTGTGGTTCAGATTCTGGTTCAAAGCTACACTGCGAGCCTCACTTCTCTGTTAACGGTTGAGCAACTACGACCAACTATAACAGATGTGCATCAACTCCTGAAGAATAGGATGAATGTTGGATACCTGAAAGGCTCTTTTGTTTATGGAATCTTGAAGGACATGGGGTTCCAAGATTACCAGCTCAATGTTTACAATTCTGCGGAGGAATGCGATGAGCTTTTCGCGAAAGGAAGTTCCAACGGCGGCATCGCTGCTGCATTTGATGAAGTCCCTTACGTGAAGCAGTTTCTTGGAACCTACTGCTCCAAGTATGTCATGGTTGAACCAAGATTTAAGACTGGCGGCTTTGGCTTTGTGTTCCCAAAAGGTTCACCTCTTGTGTCTGACATTTCAAGGGCAATCCTGAATGTGACACAGGGAGACAAAATGAGAAGAATTGAGAATGCATGGTTCAATGGAAGCACTTGTCAAGAGACTAACACACAAGTTTCTTCCAATAGTCTAGGCCTAGAAAGCTTCTGGGGTCTGTTTCTAATTGTTGGTGTTTCTTCCTTATTAGCACTCATGATCTTTTCATTCACATTCATATATCAGCAGAGACATATCTTGTTAAGCCATCATGCTTCAATATGGAGACGTATTGGTGTCTTGCTAAGTATATTCGATGAGAAAGACTTGAGCTCTCACACTTTCAAGAAGAGTGGAAAACAAGGCACAATCAGTGAAATTAGTAGTCCTTCTCATCATCATCATGGAATGGATCATGCAGTTGAGACCTCACCAAGTACACATTGCCCACCAAGTCCATCTAGTCACACAGAATCAAACTTTTCATTCCATGGAGAACAGGGAATTTTGAGTCCAGATCCATATGGTTATGGAATTCAAGGTCAAGAGGACACAGAAATGAGGGTGGTGCATAATAATATTGTTACTCCAGAGACATAG 2988 0.4304 MAKQYYCYDCSNKLVGGVIMSVWLLLLGASWAQRNNNNTAVGAGGAVRRVKVGAVVDLGTASRVGRMGLSCIRMCLSEFYGSHPHYKTRLHLITRDSQTHVLTAASQALDLIKNEQVEAILGPVTTMEATFMISLGDKAHVPIVTFSATSPSLSSLRSPYFFQVAQNDSTQVKAISALVQAFGWKEVVPIYVDNSYGEGVIPCLTNSLQQAYVRVPYLSVLPLSASDEAISEELFKLMTMQTRVFVVHMTPGLGSRVFSIANKIGMMGQGYVWIVTNGMANFFNSLDSSVMESMEGVLGVRPYVPRTKVLDDFKVRWRREFLKENPTLVDTNLNVFGVWAYDAATALAMAVEKVGITNFGFSNVSSNTSSSIVPDLENFGISQNGEKLSEALSNTRFKGLSGEFSVVGGSLQGSTLEIVNVVGNGEKRIGFWSPEKGLIRNLDTKSGTTYNTSKSNLGPIIWPGDTYSVPKGWEIPTNGRKLRVGVPVKDGSGYTEFVKISYDPSTNSTQVDGFCIDVFKAVLKELPYALPYEFIPFEKPNGEMAGTYDELVSQVYFGNYDAVVGDVTIIANRTNYIDFTLPYTESGVTMVVPVRDNRKKNAWAFLKPLTWDLWVTCACSFVFIGFVVWVLEHRINNHFRGPPSHQIGTSLWFSFSTMVFAHREKVVSNSGRFVVIVWVFVVQILVQSYTASLTSLLTVEQLRPTITDVHQLLKNRMNVGYLKGSFVYGILKDMGFQDYQLNVYNSAEECDELFAKGSSNGGIAAAFDEVPYVKQFLGTYCSKYVMVEPRFKTGGFGFVFPKGSPLVSDISRAILNVTQGDKMRRIENAWFNGSTCQETNTQVSSNSLGLESFWGLFLIVGVSSLLALMIFSFTFIYQQRHILLSHHASIWRRIGVLLSIFDEKDLSSHTFKKSGKQGTISEISSPSHHHHGMDHAVETSPSTHCPPSPSSHTESNFSFHGEQGILSPDPYGYGIQGQEDTEMRVVHNNIVTPET* 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0527 995 SMART GluR_14 483 833 IPR001320 GO:0015276|GO:0016020
Aev08g0527 995 MobiDBLite consensus disorder prediction 910 959 - -
Aev08g0527 995 Gene3D - 602 733 - -
Aev08g0527 995 Pfam Ligand-gated ion channel 833 862 IPR001320 GO:0015276|GO:0016020
Aev08g0527 995 SUPERFAMILY Periplasmic binding protein-like II 459 834 - -
Aev08g0527 995 MobiDBLite consensus disorder prediction 941 959 - -
Aev08g0527 995 MobiDBLite consensus disorder prediction 912 926 - -
Aev08g0527 995 Gene3D - 780 838 - -
Aev08g0527 995 Gene3D - 483 601 - -
Aev08g0527 995 Gene3D - 324 482 - -
Aev08g0527 995 PIRSF IGluLR_plant 14 964 IPR017103 -
Aev08g0527 995 PANTHER GLUTAMATE RECEPTOR 2.9 50 926 - -
Aev08g0527 995 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 50 926 - -
Aev08g0527 995 Pfam Receptor family ligand binding region 72 423 IPR001828 -
Aev08g0527 995 Pfam Bacterial extracellular solute-binding proteins, family 3 508 832 IPR001638 -
Aev08g0527 995 Gene3D - 167 323 - -
Aev08g0527 995 CDD PBP1_GABAb_receptor_plant 51 442 IPR044440 -
Aev08g0527 995 CDD GluR_Plant 480 831 - -
Aev08g0527 995 SUPERFAMILY Periplasmic binding protein-like I 48 464 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0527 Aev-Chr8 2984448 2990067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0527 49 954 Ion Channels AT2G29120 51.758 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0527 K05387 - tcc:18587654 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0527 08 2984448 2990067 Aev08g0527 08 2984448 2990067 ECH