Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0519 ATGTACATGGCAGATCAGGCTAATAATAATAATAACAACACGAGTGGTGGTGGTGATAAGTTGTACAAGGGTGTGCGGAAGAGGAAGTGGGGGAAATGGGTTTCGGAAGTTAGGCTTCCCAATAGCCGCGACCGCATTTGGCTTGGTTCCTTCGACTCTCCTCTGAAGGCAGCTCGCGCATTCGACGCCGCTCTTTACTGTCTCCGAGGATGTCGTGGCAATTTCAATTTCCCCGACACCCCTCTCAACTTGGACCACATCGATATTCACCGATCCTTCACTGCGCACGAGATTCAGCTGATTGCCGCCAAGTTCGCCAACGAGTGCCCTGACACTAACACTAATCAGCAGGAACAGCAACATCATCGTGATTCCTCATCAATTGGACACACCTCCAATAATAATGCTACTGATGCTGGTGCATCGAATAATATGATGCAGCAGCATGAAGGATGCGAAGGGGACATGATGGATTGGACATTTTTGAAGGAGTTGGGTGATTCTTCTTCTTCTTCTAGTGGTGATCAGTATTATTATGGACTCTATTCTCACCTAGATGACAAATTCCACTCCGGTGAGTTGTTATTCTACTCCACTACATCTACAATTTCACCCCCTCCTCATGAAGATCATAATCATGATGATGATCCTTTTTCTCATCAACCATTCCTTTGGGATTGGAAGTTTTGA 690 0.4594 MYMADQANNNNNNTSGGGDKLYKGVRKRKWGKWVSEVRLPNSRDRIWLGSFDSPLKAARAFDAALYCLRGCRGNFNFPDTPLNLDHIDIHRSFTAHEIQLIAAKFANECPDTNTNQQEQQHHRDSSSIGHTSNNNATDAGASNNMMQQHEGCEGDMMDWTFLKELGDSSSSSSGDQYYYGLYSHLDDKFHSGELLFYSTTSTISPPPHEDHNHDDDPFSHQPFLWDWKF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0519 229 Gene3D AP2/ERF domain 21 79 IPR036955 GO:0003700|GO:0006355
Aev08g0519 229 Pfam AP2 domain 22 70 IPR001471 GO:0003700|GO:0006355
Aev08g0519 229 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Aev08g0519 229 MobiDBLite consensus disorder prediction 1 20 - -
Aev08g0519 229 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Aev08g0519 229 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Aev08g0519 229 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Aev08g0519 229 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Aev08g0519 229 MobiDBLite consensus disorder prediction 110 142 - -
Aev08g0519 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 7 229 - -
Aev08g0519 229 CDD AP2 20 80 IPR001471 GO:0003700|GO:0006355
Aev08g0519 229 MobiDBLite consensus disorder prediction 1 18 - -
Aev08g0519 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0519 Aev-Chr8 2926031 2926720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0519 22 127 AP2-EREBP Transcription Factor Family AT1G19210 58.491 7.26e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev08g0519 AP2 5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0519 - - aip:107622034 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0519 08 2926031 2926720 Aev08g0519 08 2926031 2926720 ECH
Aev07g1271 07 11387264 11388037 Aev08g0519 08 2926031 2926720 ECH