Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0516 ATGGCTGTTGAGGATAGGTGGTGCGTCGTCACCGGAGGCCGCGGGTTCGCCGCTCGCCACTTGGTGGAAATGCTGATCAGAGACAAAACCTACTCCGTTCGCATCGCCGATCTGGGAGCCACCATTGAACTCGAACCATCTGAAAAGTTGGGGATTCTAGGCCAAGCCTTAAGTTCTGGTCGCGCCCAATACGTCACTTTCGATCTTCGCCACAAGTCCCAAGTCCTCAAAGCATTGGAAGGAGTCGAGGTTGTGTTCCATATGGCAGCTCCGAACTCTTCCATTAACAATTACCAGCTTCATCATTCAGTTAATGTCCAAGGAACAAAGAATGTTATCGATGCTTGTGTTGAGCTTAAAGTGAAGCGGCTTGTTTACACTAGCTCTCCTAGTGTCGTATTTGATGGGGTTCATGGGATTCATAATGGAAATGAATCACTTCCCTATCCACCTACGCATAATGATCACTATTCTGCAACTAAAGCTGAGGGTGAGACATTGGTTATTAAGGCTAATGGAACTAATGGGCTCCTAACATGCTGTATTCGACCTAGTAGCATTTTTGGGCCTGGTGATAGGCTGCTAGTTCCTTCATTAGCTGATGCTGCCAGGGCTGGGAAATCCAAGTTCATTATTGGCGATGGCAATAATGTATATGATTTCACTTATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGACCGAGCTCTAGTTTCAGAGGGGGAAGTTTCGGAAAGAGCTGCAGGACAGGCATATTTCATAACAAATATGGAACCCATAAAGTTTTGGGAGTTTGTATCGCTTATTCTGGAAGGTCTTGGATATGAAAGGCCAAGAATAAAGATACCTGCCCCTGTTATTATGCCAATTGCACATTTAGTAGAGTGGATTTATAAGCTGCTAGGTCCATATGGAATGAAGGTGCCTCAGTTGACACCTTCAAGAGTAAGACTTTTGTCTTGCACCAGATCTTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGTACCCATTACAACACTACAGGAGGGTCTGCGAAGGACAATTGATTCATACCCACACTTGAGGGCTGAAAATTACCGAAAGACTAAAAGAGAGGGGCCCTCAAAGGCTTCCATGTATCTTGGAAGTGGAAGAGTTGCTGATGCAGTGCTTTGGAAGGATAAAAAGCTATCATTTGCCACATTGGTAGTCTTGGTTGCAATATACTTCAACTTCATTGCTACTGGGAATACCATCATTACTGCTCTTTCAAAGCTTCTTTTGTTCTCATTGATCTTTTCATTTCTTCATGGCATTCTACCTGCAAAAATATTCGGATATACTGTTGAGAAAGTGCCCCAATCATGGTTTCACCTATCAGAAGACATGTCACATCAAATTGCTCTCTCAGTGGCATCATCATGGAATTTTGCTGTGAATGTCTTGAAATCCATTGCACAAGGGAATAACTGGATGCTATTCTCTAAGGTTGTTTTCTCTCTGATCATTCTTAGCTTCCTCGGAGCCTTTTCACTTCAGAACTTGTACACTATGGGAGTTACCTCTGCGTTCATAGTTTTCTACATTTATGAAAAGAAGGAGGAAGACATTGATGAGTTGTTCGTAAAGACATTCCGACCCGAGTTCATTAGTGACTTCTCTCGTTTGCGCCGCGCCACTGCTGCAACTGCAAGTGAGTGCGTCAGTCACCATTGCAATTGCAATTGCAGCTTTCCTCTCACAGCGACAGCTATGGCGGACGTAATGCTCATGCAAGATATTGAGGCCACAGCGTCTCGTCTCGGCCTCGACCTCTCCACCATTGATCTCGATTCCATTCGCCTCCCATCTGGCGACGATTGTGGCATTCCCAGTGATGACGAAGATATTTACCAAGAGGATAATCTCGAGTTCGATTCTGGATTTAGCAACATTATAGTTGTGGATAACCTCCCTGTTGTTCCAATGGAGAAGTTCGACAAGCTCGAAACCGTAATTCGCAAAATTTATAGCCAGATAGGTGTTATCAAAGATAAGGGTCTCTGGATGCCTGTTTCTCCTCCTGATTCTGACACTGCCAAGACTTTGGGTTATTGCTTCATTGAGTATAACACTCCTCAGGAAGCTGAGCTTGCTAAAGAGAAGACTCATGGATATAAATTGGACCGTTCGCACATATTTTCGGTTAGCATGTTTGACGACTTTGACAAGTTCATGAAAGTTCCGGATCAATGGGCTCCTCCTGAAACCAAGTCATATGCTTCAGGGGAAAATCTTCAGCATTGGCTCACTGATGCGAAAGCCCGAGACCAATTTGTGATTCGTGCTGGTTCAGATACTGAGGTTTTGTGGAATGATGCAAGGCAGTTGAAACCGGATCCTGTTTATAAGCGTGCATTTTGGACTGAGAGTTTCGTGCAATGGTCTCCTTTGGGCACATACTTGGCAACAGTTCACAGGCAGGGGGCAGCTGTTTGGGGAGGTGCTACAGCATTCAACCGTCTTATGCGTTATGCTCATCCTCAGGTGAAACTAATTGATTTCTCACCTAGTGAGAAGTATTTGGTAACTTATAGCAGCCACGAGCCAAGCAACCCTCGAGATGCTAATAGGGTTGTGATTAATATATTTGATGTGAGGACTGGTAAAGTGATGAGGGATTTTAAAGGAAGTGCTGATGATTTTGCTGTTGGAGTTACTGGCGGTGTCACTGGGGTGTCATGGCCTGTTTTCAAATGGAGTGGTGGAAGGGATGATAAGTACTTTGCAAGGATGGGAAAAAATGTACTTTCTGTATATGAGACCGAAACTTTTTCTCTTGTTGACAAAAAGTCCTTAAAGGTTGAAAATATAATGGACTTTAGCTGGTCTCCAACTGATCCAATTGTTGCACTCTTTGTTCCAGAGACGGGTGGTGGTAACCAGCCTGCTAGGGTAAGTCTGATTCAAATCCCCAGCAAAGAGGAACTTAGGCAAAAGAACCTTTTCAGTGTCAGTGACTGCAAGATGTACTGGCAAAGCAATGGAGATTACCTTGCTGTTAATGTAGACCGATATACTAAAACTAAAAAAAGCACTTACACAGGCTTTGAGCTTTTCCGTATAAAAGAACGTGACATACCCATAGAAGTTTTGGAGCTTGAGAATAAGAACGACAAGATCATTGCATTTGCTTGGGAGCCAAAAGGCCATAGATTTGCAGTTATTCATGGTGATAACCCTAAGCCTGATATTAGCATTTTCTCTATGCGGACTGCTCAGAACACTGGCCGTGTTTCAAAGCTCACTACTCTGAAAGGCAAGCAGGCAAATGCTCTATTTTGGTCACCTGCAGGCCGCTTCATTGTACTAGCGGGGCTGAAAGGCTTCAATGGGCAGTTGGAATTTTACAATGTTGATGAACTTGAAACCATGGCTACTGCTGAACATTTTATGGCAACAGATATTGAATGGGATCCAACTGGAAGATATGTAGTAACTTCTGTTACCTCTGTTCATGAAATGGAAAATGGCTTCAATATATGGTCTTTCAATGGCAAGCATCTCTATCGTATACTGAAGGATCACTTCTTTCAGTTCTTATGGAGACCAAGGCCACCATCATTCTTGAGTGCTGAGAAAGAGGAGGAGATTGCAAAGAACTTGAAGAAGTATAGTAAGAAATATGAAGCCGAAGACCAAGACGTGTCGTTGCAGCTGAGCGAGCAGGAGCGTGAGAAGCGTAGGATGGTGAAAGAGGAGTGGGAGAAATGGGTCAGTGAATGGAAACGGCTGCATGAAGAAGAGAAGTTGCAGAGGCAAATGCTTAGAGATGGAGAGGCTAGTGATGGAGAAGAGGAGGAATATGAGGCAAAGGACATTGAAGTTGAGGAAGTTATTGATGTTTCTGAAGAGGTCTGCACATTGCAGAGGTGTCTCTGCTCCAAACCAACCAGAATTGCATTGCAGGAATTAGTGGCTGTTATTATGGGTGGTGATGGTAGAGTTGAAGTTGTGAGTGGCAAGGGGTGCTCAAGGCTGTTTTCATCTTCATTCAGAGCTTTGCAACCATTGGAGCTAATGTCCCCTGTTTCGTCCTCTTCGCAAGTGCGATCAAATGCTCCTTTCGCTGGTCTCACTATATGCGTTACTGGTCTATCTAAAGAAGCAAGGAACCAAGTCATGGAGGCAACAGAAAGATTAGGTGGCCAGTATAGCCCCAATTTCTTTAGTGGACGCAAGTTTGAGCATGCACTAAAGCATGGAGCAAAAAATGGTCTCTTTGTTGTCACACTGGGTTGGTTTGTGGACAGTGTCAAGAAAAATGTGAGGTTGAGTGAATCACATTACAATGTGAAGAATTATGTGGACAACAACATGCGCTTGGATGATTTTAAACTGCTTCCTGGGTATGGAAATGCTGAAAATTCTTGTCTTCCAGCTAGAATCCGTGAAACCAAGCATGTTGATAACATTGAAGAATTTCAAAAGTTTTCTGGTAGAGAATCTAACAGAAGTTCGGACTTTACTTTTTCCGGTTGTTCCATTTATGTTGATCCAGAAATTTCATCCGAATTAAGGAACAAGGTTGTTGAGACTGCCTCAAGGGAAGGTGCTAGATTGGTGGAACGATGGTTTGTTGGCTGCAATGTTAGTCATGTGGTGACTGAGGGAACATCCATCCAAAGATATCTTGGATACTCGAGTAACCTCATTACACCACTGTGGATTCTCAAAACAGCTAAGGAGAAATATCTGCAAAGGCTTGTTCACATGTCTGCTGATTTGGCCAAGCAAGTTGGCCTGATGCTTGAAGACAGTAATAATGGCATTTCAGGGAAGGAAGTAATAAAGCAAAAAGTCCGTGACGATCATCAAGGCAGTGGAAGTGAAGTTAGTTTCAACGAAAGGCTACAAATTGTGAATGCTGCAAAAATAGGAGTAAGAAGTCGCCGTGGCCGTCGAATGCAGACTTGTCAGACTCCAATACGTCCCATAACACCCAACAACCTTCTAGACTCTATCTGCTGGTCAATTTCCGAGCCGACTTCAGCTGCTTCAATTTACACAGACTCTTTTAGTGCTGAAGATCCTAGAGAAAATCATGCCTCAATCTTTTTTGATGCAAAAGGGGATGGCAAAGATTCAGAAGCTTCATTTTCAAACTCCACTCGTCCTCTCACTGAAAGTGAGAAATCTGAGTTGATATTTAAAAACCATTTTCTCACCATACTTTTTCCACTGGACCGATTTTCTGAGATGGGACCCTCTTCAAGAACGTTTTTCAGCCACAATGGCTTTACGTGTCTTCAGGTGTTGGATCACATCCATGCATTTTATCAGGAGAATATGTCAAACCAAGAAATAGAGGCTGCAATTCATACCGATTCAAGACATGCTGATAGGCTTAGATCATTGTATTGCAGTAAAGAAACAGCAGAGCATGGCAATGTGATGTTCAAACGTATCGAGTTCTTGGGCAGTCGCACAAGTTTTGAAATGATGAAGCGTGTAAGTGGGGACAACAACTCCAACGTGTATGAGCTATTACTTAGGGCATGA 5529 0.4341 MAVEDRWCVVTGGRGFAARHLVEMLIRDKTYSVRIADLGATIELEPSEKLGILGQALSSGRAQYVTFDLRHKSQVLKALEGVEVVFHMAAPNSSINNYQLHHSVNVQGTKNVIDACVELKVKRLVYTSSPSVVFDGVHGIHNGNESLPYPPTHNDHYSATKAEGETLVIKANGTNGLLTCCIRPSSIFGPGDRLLVPSLADAARAGKSKFIIGDGNNVYDFTYVENVAHAHICADRALVSEGEVSERAAGQAYFITNMEPIKFWEFVSLILEGLGYERPRIKIPAPVIMPIAHLVEWIYKLLGPYGMKVPQLTPSRVRLLSCTRSFDCSKAKDRLGYVPITTLQEGLRRTIDSYPHLRAENYRKTKREGPSKASMYLGSGRVADAVLWKDKKLSFATLVVLVAIYFNFIATGNTIITALSKLLLFSLIFSFLHGILPAKIFGYTVEKVPQSWFHLSEDMSHQIALSVASSWNFAVNVLKSIAQGNNWMLFSKVVFSLIILSFLGAFSLQNLYTMGVTSAFIVFYIYEKKEEDIDELFVKTFRPEFISDFSRLRRATAATASECVSHHCNCNCSFPLTATAMADVMLMQDIEATASRLGLDLSTIDLDSIRLPSGDDCGIPSDDEDIYQEDNLEFDSGFSNIIVVDNLPVVPMEKFDKLETVIRKIYSQIGVIKDKGLWMPVSPPDSDTAKTLGYCFIEYNTPQEAELAKEKTHGYKLDRSHIFSVSMFDDFDKFMKVPDQWAPPETKSYASGENLQHWLTDAKARDQFVIRAGSDTEVLWNDARQLKPDPVYKRAFWTESFVQWSPLGTYLATVHRQGAAVWGGATAFNRLMRYAHPQVKLIDFSPSEKYLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRDFKGSADDFAVGVTGGVTGVSWPVFKWSGGRDDKYFARMGKNVLSVYETETFSLVDKKSLKVENIMDFSWSPTDPIVALFVPETGGGNQPARVSLIQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVNVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPKPDISIFSMRTAQNTGRVSKLTTLKGKQANALFWSPAGRFIVLAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVVTSVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPSFLSAEKEEEIAKNLKKYSKKYEAEDQDVSLQLSEQEREKRRMVKEEWEKWVSEWKRLHEEEKLQRQMLRDGEASDGEEEEYEAKDIEVEEVIDVSEEVCTLQRCLCSKPTRIALQELVAVIMGGDGRVEVVSGKGCSRLFSSSFRALQPLELMSPVSSSSQVRSNAPFAGLTICVTGLSKEARNQVMEATERLGGQYSPNFFSGRKFEHALKHGAKNGLFVVTLGWFVDSVKKNVRLSESHYNVKNYVDNNMRLDDFKLLPGYGNAENSCLPARIRETKHVDNIEEFQKFSGRESNRSSDFTFSGCSIYVDPEISSELRNKVVETASREGARLVERWFVGCNVSHVVTEGTSIQRYLGYSSNLITPLWILKTAKEKYLQRLVHMSADLAKQVGLMLEDSNNGISGKEVIKQKVRDDHQGSGSEVSFNERLQIVNAAKIGVRSRRGRRMQTCQTPIRPITPNNLLDSICWSISEPTSAASIYTDSFSAEDPRENHASIFFDAKGDGKDSEASFSNSTRPLTESEKSELIFKNHFLTILFPLDRFSEMGPSSRTFFSHNGFTCLQVLDHIHAFYQENMSNQEIEAAIHTDSRHADRLRSLYCSKETAEHGNVMFKRIEFLGSRTSFEMMKRVSGDNNSNVYELLLRA* 1843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0516 1842 Gene3D - 2 358 - -
Aev08g0516 1842 ProSiteProfiles BRCT domain profile. 1495 1573 IPR001357 -
Aev08g0516 1842 SUPERFAMILY BRCT domain 1364 1442 IPR036420 -
Aev08g0516 1842 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 662 720 IPR000504 GO:0003723
Aev08g0516 1842 Gene3D BRCT domain 1363 1443 IPR036420 -
Aev08g0516 1842 Gene3D - 998 1208 IPR015943 GO:0005515
Aev08g0516 1842 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 283 IPR002225 GO:0003854|GO:0006694|GO:0016616
Aev08g0516 1842 PANTHER BNACNNG51870D PROTEIN 585 1296 - -
Aev08g0516 1842 SMART BRCT_7 1362 1431 IPR001357 -
Aev08g0516 1842 SMART BRCT_7 1497 1573 IPR001357 -
Aev08g0516 1842 Pfam Reticulon 382 538 IPR003388 -
Aev08g0516 1842 SUPERFAMILY DPP6 N-terminal domain-like 800 1183 - -
Aev08g0516 1842 Hamap Eukaryotic translation initiation factor 3 subunit B [EIF3B]. 628 1297 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aev08g0516 1842 Gene3D - 639 726 IPR012677 -
Aev08g0516 1842 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 354 IPR036291 -
Aev08g0516 1842 ProSiteProfiles Reticulon domain profile. 382 545 IPR003388 -
Aev08g0516 1842 CDD BRCT_TopBP1_rpt2_like 1364 1431 - -
Aev08g0516 1842 ProSiteProfiles BRCT domain profile. 1360 1441 IPR001357 -
Aev08g0516 1842 SMART rrm1_1 641 726 IPR000504 GO:0003723
Aev08g0516 1842 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 585 1296 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Aev08g0516 1842 Coils Coil 1201 1221 - -
Aev08g0516 1842 Gene3D - 765 966 IPR015943 GO:0005515
Aev08g0516 1842 CDD RRM_eIF3B 639 725 IPR034363 -
Aev08g0516 1842 Pfam Eukaryotic translation initiation factor eIF2A 989 1189 IPR013979 -
Aev08g0516 1842 SUPERFAMILY RNA-binding domain, RBD 630 722 IPR035979 GO:0003676
Aev08g0516 1842 Pfam Family of unknown function (DUF6699) 1750 1826 IPR046522 -
Aev08g0516 1842 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 640 730 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0516 Aev-Chr8 2890441 2911042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0516 585 1296 Eukaryotic Initiation Factors Gene Family AT5G27640 75.702 0.0 1177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0516 K03253 - gmx:100779711 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0516 08 2890441 2911042 Aev08g0516 08 2890441 2911042 ECH