Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev08g0516 | ATGGCTGTTGAGGATAGGTGGTGCGTCGTCACCGGAGGCCGCGGGTTCGCCGCTCGCCACTTGGTGGAAATGCTGATCAGAGACAAAACCTACTCCGTTCGCATCGCCGATCTGGGAGCCACCATTGAACTCGAACCATCTGAAAAGTTGGGGATTCTAGGCCAAGCCTTAAGTTCTGGTCGCGCCCAATACGTCACTTTCGATCTTCGCCACAAGTCCCAAGTCCTCAAAGCATTGGAAGGAGTCGAGGTTGTGTTCCATATGGCAGCTCCGAACTCTTCCATTAACAATTACCAGCTTCATCATTCAGTTAATGTCCAAGGAACAAAGAATGTTATCGATGCTTGTGTTGAGCTTAAAGTGAAGCGGCTTGTTTACACTAGCTCTCCTAGTGTCGTATTTGATGGGGTTCATGGGATTCATAATGGAAATGAATCACTTCCCTATCCACCTACGCATAATGATCACTATTCTGCAACTAAAGCTGAGGGTGAGACATTGGTTATTAAGGCTAATGGAACTAATGGGCTCCTAACATGCTGTATTCGACCTAGTAGCATTTTTGGGCCTGGTGATAGGCTGCTAGTTCCTTCATTAGCTGATGCTGCCAGGGCTGGGAAATCCAAGTTCATTATTGGCGATGGCAATAATGTATATGATTTCACTTATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGACCGAGCTCTAGTTTCAGAGGGGGAAGTTTCGGAAAGAGCTGCAGGACAGGCATATTTCATAACAAATATGGAACCCATAAAGTTTTGGGAGTTTGTATCGCTTATTCTGGAAGGTCTTGGATATGAAAGGCCAAGAATAAAGATACCTGCCCCTGTTATTATGCCAATTGCACATTTAGTAGAGTGGATTTATAAGCTGCTAGGTCCATATGGAATGAAGGTGCCTCAGTTGACACCTTCAAGAGTAAGACTTTTGTCTTGCACCAGATCTTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGTACCCATTACAACACTACAGGAGGGTCTGCGAAGGACAATTGATTCATACCCACACTTGAGGGCTGAAAATTACCGAAAGACTAAAAGAGAGGGGCCCTCAAAGGCTTCCATGTATCTTGGAAGTGGAAGAGTTGCTGATGCAGTGCTTTGGAAGGATAAAAAGCTATCATTTGCCACATTGGTAGTCTTGGTTGCAATATACTTCAACTTCATTGCTACTGGGAATACCATCATTACTGCTCTTTCAAAGCTTCTTTTGTTCTCATTGATCTTTTCATTTCTTCATGGCATTCTACCTGCAAAAATATTCGGATATACTGTTGAGAAAGTGCCCCAATCATGGTTTCACCTATCAGAAGACATGTCACATCAAATTGCTCTCTCAGTGGCATCATCATGGAATTTTGCTGTGAATGTCTTGAAATCCATTGCACAAGGGAATAACTGGATGCTATTCTCTAAGGTTGTTTTCTCTCTGATCATTCTTAGCTTCCTCGGAGCCTTTTCACTTCAGAACTTGTACACTATGGGAGTTACCTCTGCGTTCATAGTTTTCTACATTTATGAAAAGAAGGAGGAAGACATTGATGAGTTGTTCGTAAAGACATTCCGACCCGAGTTCATTAGTGACTTCTCTCGTTTGCGCCGCGCCACTGCTGCAACTGCAAGTGAGTGCGTCAGTCACCATTGCAATTGCAATTGCAGCTTTCCTCTCACAGCGACAGCTATGGCGGACGTAATGCTCATGCAAGATATTGAGGCCACAGCGTCTCGTCTCGGCCTCGACCTCTCCACCATTGATCTCGATTCCATTCGCCTCCCATCTGGCGACGATTGTGGCATTCCCAGTGATGACGAAGATATTTACCAAGAGGATAATCTCGAGTTCGATTCTGGATTTAGCAACATTATAGTTGTGGATAACCTCCCTGTTGTTCCAATGGAGAAGTTCGACAAGCTCGAAACCGTAATTCGCAAAATTTATAGCCAGATAGGTGTTATCAAAGATAAGGGTCTCTGGATGCCTGTTTCTCCTCCTGATTCTGACACTGCCAAGACTTTGGGTTATTGCTTCATTGAGTATAACACTCCTCAGGAAGCTGAGCTTGCTAAAGAGAAGACTCATGGATATAAATTGGACCGTTCGCACATATTTTCGGTTAGCATGTTTGACGACTTTGACAAGTTCATGAAAGTTCCGGATCAATGGGCTCCTCCTGAAACCAAGTCATATGCTTCAGGGGAAAATCTTCAGCATTGGCTCACTGATGCGAAAGCCCGAGACCAATTTGTGATTCGTGCTGGTTCAGATACTGAGGTTTTGTGGAATGATGCAAGGCAGTTGAAACCGGATCCTGTTTATAAGCGTGCATTTTGGACTGAGAGTTTCGTGCAATGGTCTCCTTTGGGCACATACTTGGCAACAGTTCACAGGCAGGGGGCAGCTGTTTGGGGAGGTGCTACAGCATTCAACCGTCTTATGCGTTATGCTCATCCTCAGGTGAAACTAATTGATTTCTCACCTAGTGAGAAGTATTTGGTAACTTATAGCAGCCACGAGCCAAGCAACCCTCGAGATGCTAATAGGGTTGTGATTAATATATTTGATGTGAGGACTGGTAAAGTGATGAGGGATTTTAAAGGAAGTGCTGATGATTTTGCTGTTGGAGTTACTGGCGGTGTCACTGGGGTGTCATGGCCTGTTTTCAAATGGAGTGGTGGAAGGGATGATAAGTACTTTGCAAGGATGGGAAAAAATGTACTTTCTGTATATGAGACCGAAACTTTTTCTCTTGTTGACAAAAAGTCCTTAAAGGTTGAAAATATAATGGACTTTAGCTGGTCTCCAACTGATCCAATTGTTGCACTCTTTGTTCCAGAGACGGGTGGTGGTAACCAGCCTGCTAGGGTAAGTCTGATTCAAATCCCCAGCAAAGAGGAACTTAGGCAAAAGAACCTTTTCAGTGTCAGTGACTGCAAGATGTACTGGCAAAGCAATGGAGATTACCTTGCTGTTAATGTAGACCGATATACTAAAACTAAAAAAAGCACTTACACAGGCTTTGAGCTTTTCCGTATAAAAGAACGTGACATACCCATAGAAGTTTTGGAGCTTGAGAATAAGAACGACAAGATCATTGCATTTGCTTGGGAGCCAAAAGGCCATAGATTTGCAGTTATTCATGGTGATAACCCTAAGCCTGATATTAGCATTTTCTCTATGCGGACTGCTCAGAACACTGGCCGTGTTTCAAAGCTCACTACTCTGAAAGGCAAGCAGGCAAATGCTCTATTTTGGTCACCTGCAGGCCGCTTCATTGTACTAGCGGGGCTGAAAGGCTTCAATGGGCAGTTGGAATTTTACAATGTTGATGAACTTGAAACCATGGCTACTGCTGAACATTTTATGGCAACAGATATTGAATGGGATCCAACTGGAAGATATGTAGTAACTTCTGTTACCTCTGTTCATGAAATGGAAAATGGCTTCAATATATGGTCTTTCAATGGCAAGCATCTCTATCGTATACTGAAGGATCACTTCTTTCAGTTCTTATGGAGACCAAGGCCACCATCATTCTTGAGTGCTGAGAAAGAGGAGGAGATTGCAAAGAACTTGAAGAAGTATAGTAAGAAATATGAAGCCGAAGACCAAGACGTGTCGTTGCAGCTGAGCGAGCAGGAGCGTGAGAAGCGTAGGATGGTGAAAGAGGAGTGGGAGAAATGGGTCAGTGAATGGAAACGGCTGCATGAAGAAGAGAAGTTGCAGAGGCAAATGCTTAGAGATGGAGAGGCTAGTGATGGAGAAGAGGAGGAATATGAGGCAAAGGACATTGAAGTTGAGGAAGTTATTGATGTTTCTGAAGAGGTCTGCACATTGCAGAGGTGTCTCTGCTCCAAACCAACCAGAATTGCATTGCAGGAATTAGTGGCTGTTATTATGGGTGGTGATGGTAGAGTTGAAGTTGTGAGTGGCAAGGGGTGCTCAAGGCTGTTTTCATCTTCATTCAGAGCTTTGCAACCATTGGAGCTAATGTCCCCTGTTTCGTCCTCTTCGCAAGTGCGATCAAATGCTCCTTTCGCTGGTCTCACTATATGCGTTACTGGTCTATCTAAAGAAGCAAGGAACCAAGTCATGGAGGCAACAGAAAGATTAGGTGGCCAGTATAGCCCCAATTTCTTTAGTGGACGCAAGTTTGAGCATGCACTAAAGCATGGAGCAAAAAATGGTCTCTTTGTTGTCACACTGGGTTGGTTTGTGGACAGTGTCAAGAAAAATGTGAGGTTGAGTGAATCACATTACAATGTGAAGAATTATGTGGACAACAACATGCGCTTGGATGATTTTAAACTGCTTCCTGGGTATGGAAATGCTGAAAATTCTTGTCTTCCAGCTAGAATCCGTGAAACCAAGCATGTTGATAACATTGAAGAATTTCAAAAGTTTTCTGGTAGAGAATCTAACAGAAGTTCGGACTTTACTTTTTCCGGTTGTTCCATTTATGTTGATCCAGAAATTTCATCCGAATTAAGGAACAAGGTTGTTGAGACTGCCTCAAGGGAAGGTGCTAGATTGGTGGAACGATGGTTTGTTGGCTGCAATGTTAGTCATGTGGTGACTGAGGGAACATCCATCCAAAGATATCTTGGATACTCGAGTAACCTCATTACACCACTGTGGATTCTCAAAACAGCTAAGGAGAAATATCTGCAAAGGCTTGTTCACATGTCTGCTGATTTGGCCAAGCAAGTTGGCCTGATGCTTGAAGACAGTAATAATGGCATTTCAGGGAAGGAAGTAATAAAGCAAAAAGTCCGTGACGATCATCAAGGCAGTGGAAGTGAAGTTAGTTTCAACGAAAGGCTACAAATTGTGAATGCTGCAAAAATAGGAGTAAGAAGTCGCCGTGGCCGTCGAATGCAGACTTGTCAGACTCCAATACGTCCCATAACACCCAACAACCTTCTAGACTCTATCTGCTGGTCAATTTCCGAGCCGACTTCAGCTGCTTCAATTTACACAGACTCTTTTAGTGCTGAAGATCCTAGAGAAAATCATGCCTCAATCTTTTTTGATGCAAAAGGGGATGGCAAAGATTCAGAAGCTTCATTTTCAAACTCCACTCGTCCTCTCACTGAAAGTGAGAAATCTGAGTTGATATTTAAAAACCATTTTCTCACCATACTTTTTCCACTGGACCGATTTTCTGAGATGGGACCCTCTTCAAGAACGTTTTTCAGCCACAATGGCTTTACGTGTCTTCAGGTGTTGGATCACATCCATGCATTTTATCAGGAGAATATGTCAAACCAAGAAATAGAGGCTGCAATTCATACCGATTCAAGACATGCTGATAGGCTTAGATCATTGTATTGCAGTAAAGAAACAGCAGAGCATGGCAATGTGATGTTCAAACGTATCGAGTTCTTGGGCAGTCGCACAAGTTTTGAAATGATGAAGCGTGTAAGTGGGGACAACAACTCCAACGTGTATGAGCTATTACTTAGGGCATGA | 5529 | 0.4341 | MAVEDRWCVVTGGRGFAARHLVEMLIRDKTYSVRIADLGATIELEPSEKLGILGQALSSGRAQYVTFDLRHKSQVLKALEGVEVVFHMAAPNSSINNYQLHHSVNVQGTKNVIDACVELKVKRLVYTSSPSVVFDGVHGIHNGNESLPYPPTHNDHYSATKAEGETLVIKANGTNGLLTCCIRPSSIFGPGDRLLVPSLADAARAGKSKFIIGDGNNVYDFTYVENVAHAHICADRALVSEGEVSERAAGQAYFITNMEPIKFWEFVSLILEGLGYERPRIKIPAPVIMPIAHLVEWIYKLLGPYGMKVPQLTPSRVRLLSCTRSFDCSKAKDRLGYVPITTLQEGLRRTIDSYPHLRAENYRKTKREGPSKASMYLGSGRVADAVLWKDKKLSFATLVVLVAIYFNFIATGNTIITALSKLLLFSLIFSFLHGILPAKIFGYTVEKVPQSWFHLSEDMSHQIALSVASSWNFAVNVLKSIAQGNNWMLFSKVVFSLIILSFLGAFSLQNLYTMGVTSAFIVFYIYEKKEEDIDELFVKTFRPEFISDFSRLRRATAATASECVSHHCNCNCSFPLTATAMADVMLMQDIEATASRLGLDLSTIDLDSIRLPSGDDCGIPSDDEDIYQEDNLEFDSGFSNIIVVDNLPVVPMEKFDKLETVIRKIYSQIGVIKDKGLWMPVSPPDSDTAKTLGYCFIEYNTPQEAELAKEKTHGYKLDRSHIFSVSMFDDFDKFMKVPDQWAPPETKSYASGENLQHWLTDAKARDQFVIRAGSDTEVLWNDARQLKPDPVYKRAFWTESFVQWSPLGTYLATVHRQGAAVWGGATAFNRLMRYAHPQVKLIDFSPSEKYLVTYSSHEPSNPRDANRVVINIFDVRTGKVMRDFKGSADDFAVGVTGGVTGVSWPVFKWSGGRDDKYFARMGKNVLSVYETETFSLVDKKSLKVENIMDFSWSPTDPIVALFVPETGGGNQPARVSLIQIPSKEELRQKNLFSVSDCKMYWQSNGDYLAVNVDRYTKTKKSTYTGFELFRIKERDIPIEVLELENKNDKIIAFAWEPKGHRFAVIHGDNPKPDISIFSMRTAQNTGRVSKLTTLKGKQANALFWSPAGRFIVLAGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVVTSVTSVHEMENGFNIWSFNGKHLYRILKDHFFQFLWRPRPPSFLSAEKEEEIAKNLKKYSKKYEAEDQDVSLQLSEQEREKRRMVKEEWEKWVSEWKRLHEEEKLQRQMLRDGEASDGEEEEYEAKDIEVEEVIDVSEEVCTLQRCLCSKPTRIALQELVAVIMGGDGRVEVVSGKGCSRLFSSSFRALQPLELMSPVSSSSQVRSNAPFAGLTICVTGLSKEARNQVMEATERLGGQYSPNFFSGRKFEHALKHGAKNGLFVVTLGWFVDSVKKNVRLSESHYNVKNYVDNNMRLDDFKLLPGYGNAENSCLPARIRETKHVDNIEEFQKFSGRESNRSSDFTFSGCSIYVDPEISSELRNKVVETASREGARLVERWFVGCNVSHVVTEGTSIQRYLGYSSNLITPLWILKTAKEKYLQRLVHMSADLAKQVGLMLEDSNNGISGKEVIKQKVRDDHQGSGSEVSFNERLQIVNAAKIGVRSRRGRRMQTCQTPIRPITPNNLLDSICWSISEPTSAASIYTDSFSAEDPRENHASIFFDAKGDGKDSEASFSNSTRPLTESEKSELIFKNHFLTILFPLDRFSEMGPSSRTFFSHNGFTCLQVLDHIHAFYQENMSNQEIEAAIHTDSRHADRLRSLYCSKETAEHGNVMFKRIEFLGSRTSFEMMKRVSGDNNSNVYELLLRA* | 1843 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev08g0516 | 1842 | Gene3D | - | 2 | 358 | - | - | |
Aev08g0516 | 1842 | ProSiteProfiles | BRCT domain profile. | 1495 | 1573 | IPR001357 | - | |
Aev08g0516 | 1842 | SUPERFAMILY | BRCT domain | 1364 | 1442 | IPR036420 | - | |
Aev08g0516 | 1842 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 662 | 720 | IPR000504 | GO:0003723 | |
Aev08g0516 | 1842 | Gene3D | BRCT domain | 1363 | 1443 | IPR036420 | - | |
Aev08g0516 | 1842 | Gene3D | - | 998 | 1208 | IPR015943 | GO:0005515 | |
Aev08g0516 | 1842 | Pfam | 3-beta hydroxysteroid dehydrogenase/isomerase family | 9 | 283 | IPR002225 | GO:0003854|GO:0006694|GO:0016616 | |
Aev08g0516 | 1842 | PANTHER | BNACNNG51870D PROTEIN | 585 | 1296 | - | - | |
Aev08g0516 | 1842 | SMART | BRCT_7 | 1362 | 1431 | IPR001357 | - | |
Aev08g0516 | 1842 | SMART | BRCT_7 | 1497 | 1573 | IPR001357 | - | |
Aev08g0516 | 1842 | Pfam | Reticulon | 382 | 538 | IPR003388 | - | |
Aev08g0516 | 1842 | SUPERFAMILY | DPP6 N-terminal domain-like | 800 | 1183 | - | - | |
Aev08g0516 | 1842 | Hamap | Eukaryotic translation initiation factor 3 subunit B [EIF3B]. | 628 | 1297 | IPR011400 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Aev08g0516 | 1842 | Gene3D | - | 639 | 726 | IPR012677 | - | |
Aev08g0516 | 1842 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 5 | 354 | IPR036291 | - | |
Aev08g0516 | 1842 | ProSiteProfiles | Reticulon domain profile. | 382 | 545 | IPR003388 | - | |
Aev08g0516 | 1842 | CDD | BRCT_TopBP1_rpt2_like | 1364 | 1431 | - | - | |
Aev08g0516 | 1842 | ProSiteProfiles | BRCT domain profile. | 1360 | 1441 | IPR001357 | - | |
Aev08g0516 | 1842 | SMART | rrm1_1 | 641 | 726 | IPR000504 | GO:0003723 | |
Aev08g0516 | 1842 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED | 585 | 1296 | IPR011400 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Aev08g0516 | 1842 | Coils | Coil | 1201 | 1221 | - | - | |
Aev08g0516 | 1842 | Gene3D | - | 765 | 966 | IPR015943 | GO:0005515 | |
Aev08g0516 | 1842 | CDD | RRM_eIF3B | 639 | 725 | IPR034363 | - | |
Aev08g0516 | 1842 | Pfam | Eukaryotic translation initiation factor eIF2A | 989 | 1189 | IPR013979 | - | |
Aev08g0516 | 1842 | SUPERFAMILY | RNA-binding domain, RBD | 630 | 722 | IPR035979 | GO:0003676 | |
Aev08g0516 | 1842 | Pfam | Family of unknown function (DUF6699) | 1750 | 1826 | IPR046522 | - | |
Aev08g0516 | 1842 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 640 | 730 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev08g0516 | Aev-Chr8 | 2890441 | 2911042 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev08g0516 | 585 | 1296 | Eukaryotic Initiation Factors Gene Family | AT5G27640 | 75.702 | 0.0 | 1177 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev08g0516 | K03253 | - | gmx:100779711 | 1292.33 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev08g0516 | 08 | 2890441 | 2911042 | Aev08g0516 | 08 | 2890441 | 2911042 | ECH |