Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev08g0515 | ATGATTTTTTGCAACCTAAAACCTTTGATCGTGTCGCTGCCTCTGTTACCTATCATATCACCTAAAAAGATTCAATCTTGTTGCTTTCTTTATTGTTTTTTAATTTCTCTTCGATTTTTTTATTTTTTTATCTTCAACATGGATTCATCAGAGGCAGAGCAGAACCAACATTGTCCCAAGCGAACCTTCGAAAAATACACAAAGCCCAAACCTGATGATTCCCCGCTTTCTGACAGTGACACTCCCCAGAACATGGACCCCAGAAGGTATCAGTTAGAGGTATTTGAAGTAGCAAAGAAAAGGAACACAATAGCAGTGTTGGATACTGGTGCTGGCAAAACCTTGATAGCTGTTCTGCTTATAAAGGAAATTGGTCAAGCGATCAGGTCCAATGGCCTCAAGAAAGTCATCATTTTCTTAGCTCCCACTGTACATCTTGTCAATCAGCAATTTAAGAATATTAAACATCTTACAGATTTTCAAGTTCAGGAATATTATGGGGCTAAAGGAGTGGATGCATGGGATTTAAAGATATGGGAAAAGGAGATTAGTGACTATGATGTACTGGTTATGACACCCCAGATTCTTTTGGATGCATTAAGAAAGGCATTCCTGAAGGTAGAAGTGATATGCTTGATGATCATTGATGAATGCCACAGAGCAACTGGCAACCATCCCTATGCAAAAATAATGAAGGAATTCTATCACAAAGCTAATGAAAAGCCTAAGATTTTTGGGATGACAGCATCGCCAGTAGGTAAAAAAGGCGTTTCCTCTACTATGGATTGTCGGGGTCAGATATTGGACCTTGAAAGTATCTTGGATTCCCAGAGATATACTGTTGAGGATAGGACAGAGATAGATGTGTATATACCTTCTGCGAAAGAGAGTTGTAGATATTACGACCAAGCACAATTCCCCGCTTTGAGTTTGAAGCCAAAGATTGAAGCCTTGTGGTCTAAGTCTGCTGCATTGTTCTCTGAATTACAAAGCTCAGAACAACCAAACTATAAGGATGTGGACAATAAATTGAAGTCGATGCGTAAGCGGATGTCCAATGAACTTGCAAAAGTTTTATATTGCCTTGAAGATCTTGGACTCCTATGTGCTTATGAGGCTGTTAAAATATGGCAAGAGAATTTCTCCAAAGTTGAAGGAGAGTGTGAAGTTTATCAAAAAGCTTATCTTCAGTGTAAAGCCTTCATTGACGTAGTAATGCAAACAGTTGAAGAGTCCCTTCAACTTGATGATAACAAGACTCTGGAGGTTCAGTTTGATTTTTCAAAGGGAGTAAACTTGGGATATTTATCTCCCAAATTACTTGAACTTATTAAAGTCATCCAGTCCTTTGGAGACTCATGCACGGTATTGTCCCTCGTTTTTGTTGAAAGAATCATTACAGCCAAGGTGATTGAAAGATTTATAAAGACAGTTCCACAGATATCTCATTTCACAGTTTCGTATTTAGCCGGAAACAGTACATCAGTTGGTGCACTGACTACCAAGAGGCAGAAAGAGATATTGGATTCTTTCCGTTCTGGAAAGGTCAATATATTATTTACTACTGATGTCATTGAGGAAGGAATTCATGTGCCAAACTGCTCTTGTGTCATACGTTTTGACCTACCCAAAACACTTCGCAGTTATGTCCAATCTCGAGGAAGATCTAGGCAGGCTAACTCTCAATTTATTGTGATGTTGGAGAGGGGAAACATGAATCAAAGAAATCAACTTTTTGACATCATCAGGAGTGAGCGATCAATGTCTGAAGCAGCTATTTATAAAGAACATGATTCTCCGAGTTTAAGGCCGATCGCACAAGGGAAAACAGAGATATACTATGTTGAGTCTACTGGAGCATCGGTCACTTTGGACTCCAGTGTTAGTCTTTTGAATCGATATTGTGAAAAGCTACCATGTGATGAGTACTCCCGTGTAAAGCCAACTTTCGAGATCCTGCCTATGGAAGGGTGTTACCAGTGTAAGTTAACACTACCACCTAATGCAGCTTTCCAAACAATAGTTGGTCCCTCGGGAAAAGATGTTCGTTTGGCAAGGCATCTTGCTTGCTTAGAAGCTTGTAAGAAGCTACATCAAATGGGCGCCTTAAATGATCATCTTGTTCCGTTCACGGAAGAGCCTTTAGAAGCTGAACATAGTGTGAAAAACAAAGGATCAAGTTCAGGTGCAGGAACCACAAGAAGAAAGGAGTTACATGGCACGACCAGCATTCATGCATTGTGTGGTACATGGGATGACAAACTTGATGGAGCCAAATTTCATGCCTATAGATTTGATTTCACATGCAATATTGTCAGCGAAATTTACTCTGGATTTGTTCTCCTGATTGAGTCAAAGCTTGATGATGATGTTGGAAATATGGAATTAGATCTTTATTTGATCTCCAAAACTGTGAAGGCTTCTGTATCTTTCTGTGGGCAAGTTAGTTTAAATGCTGAGCAGATGATGAATGCAAAACGCTTTCATGAACTTTTCTTCAATGGTTTGTTTGGGAAATTGGTTGTTTGGTCCAAGTCATCAAAACGACAAAGGGAGTTTTTACTTCAGGAAGACAATACATCATTGTGGAGCGCAATAAACTTCTATTTGCTTCTACCGCTTGAGAAATTGAATGATGAATGTAAGGGGTCCTTGGAAATAAATTGGTTGGGAATAAATTCTTGTGTTTCTGCTGTTGATTTTTTAAGGAAGAAGTTTTCGGTGGCTGCTGGAAATTGTGAGGATGACAAAAAAGTCACATCACCTAGTCCTTGTGATACCAATTCTTCACAGGTGGAATGTAACGGCAAAAGCGAGATTCATTTTGCTAATTGTGTGGTTGATGTTAATAATATAAAGAATAGGGTAGTTTTGGCCGCTCACACTGGGAGAATATATTGTATTCTTGAAGCAGATAATAATCTATCTGCTGAAAGTCCTTTCGACGGAAACGATGAAAAGTCTCCGGAGAAACATATTACCTTCTCTGCTTACTACAAGAAAAGGTATGGGATTACACTGAGACATCCAGGACAGCCTTTGTTACGTTTGAAGCAAAGTCATAACGCTCACAATCTTCTTTTGAATTTCCATGAGGAAGATGATAAGGACAAGTCATCACACATTGGCCCTGCAAACACAAAAGTGCCTGCAATTGTTAACATTCCACCTGAGCTTTTATGTGTGCTTGATGTTAAAAGAGATATTTTGAAGTCAATGTACTTGCTACCATCACTGATGCATCGTCTTGAATCCCTCATGTTGTCTACTCAGCTTAGAGAAGAGATAGATGGTCAGACTAACAAGTTCAACATACCTAGCTCTCTGATTCTAGAAGCACTCACAACTTTAAGATGTTGTGAAAAATTTTCTATGGAACGTCTTGAGTTGCTAGGAGATTCGGTTCTAAAATATGCGGTGAGCTGTCACCTGTTTCTTAAGTATCCTAAGAAACATGAAGGACATTTATCTTCCAAACGGTCATGGGCTGTTTGTAATTCAACCCTGCATAAACTGGGAACAGATCGCAAAGTACAGGGATATATCCGAGACTCTGCATTTGAACCACGCCGTTGGGTTGCCCCAGGACAGCGCTCTATACATGCTGTTCGTTGTGAGTGTGGGTTGGACTCCCGAGAAGTCCCTGTAGATGAAAAATTCCATACGGAAGATCCAAAAGTAGTGGTTGGGAAGTCCTGTGACACGGGCCACCGCTGGATGTGTTCAAAGACAATTTCCGATTGTGTTGAAGCTCTAATAGGAGCATACTATGTGAGCGGTGGGCTGATTGCTTCGCTACATGTGATGAAGTGGCTTGGGATTGATGCTGAACTAGAGCCATCCTTGGTCGATGAAGCCATCACTGCAGCATCACTCCATACATATGTACCAAAGATGAAAGAGATTGAAAAACTCGAGAAGAAAATTAAGTTTGAATTTTCTGTTAAGGGTCTCTTGTTGGAGGCAATCACACATATGTCTGGGGCGGAACTTGGGATTGGCTCCTGTTATGAGAGGCTTGAATTTCTTGGTGACTCCGTGTTAGATCTTCTCATCACGTGGCATCTTTATCAGAACCATCAAGATATTGATCCAGGAGAGTTGACTGACTTGCGTTCTGCTTCCGTCAATAATGATAGTTTTGCTCAAGTTTCTGTTAGGCGAAACCTTTACCCGCATCTTCAGCATAGCTCAGGAGTGTTACTGGGCCAGATATTGGAATATGTTACGGTCATTTCTGAATCAGAGAGCTCCACAAGATCACTTCCAGGCATCAAAGCTCCCAAGGCACTTGGAGATCTAGTGGAAAGTATTGCTGGGGCTATACTAATAGATACCAAGCTCAATCTTGATGAAGTGTGGAAAGTTTTCAATCCTCTATTATCTCCCATTGTTACTCCTGACAAACTTCAGTTGCCTCCACTGCGGGAACTAATTGAACTATGCGACTCTCTTGGGTATTTTGTTAAAGAAAATTGTAAAAGGAAGGGGACTACGGTGCATGCCGAGCTTAGTGTACAGCTGCCAAATGCCCTCTTAGTTCAAGAGGGAAAGGGGATAAACAAAAAAATAGCAAAAGGAGATGCAGCATTTCGTTTGTTGAAGGATCTTGAGAAGAAGGGAATTTCACATGGTGGTAGCACGTCGAAGAGAAAAAGAGAGAATCTTGACCAACTTCGCGATTCATCTCATCTCGAAACAGATATTAGTAATTGCCAGAGTGAAACTAAGAAAAGGACAAAAGTTGATGAAACTAACATAACTGGAAGTGCATCTGCCGATTTGTTGCCGCACAAGGACTCTTCCGAGGAAGTCTCTGATCTTGATGCTTCCATTCCAGTTATTGAATCTATCAACATGAAGAAGGGAGGGCCCAGAACCACACTATATGAACTGTGCAAGAAATTACAATGGCCGTTGCCTGCATTTGATTCAACAGAATACAAAGACAGAACTCTTTTCGAGTCTTGCGAGGCCCTGGAAGGATGCAAAGGAGCTAACTGTTTTGTGTCGACAATTACCTTGTGCATACCGAATGATTGTAACGTAGAATGCGAAGGAGAAGCTAGAAGTGATAAGAAGAGCTCATTTGACTCTGCTGCAGTTGAAATGCTTAATAAGCTGCAACGACTGGGAAAACTTAAGATTGGTTCCCATAACTTGGAAACATGTTTATTGGAAGCATTGTAA | 5190 | 0.4056 | MIFCNLKPLIVSLPLLPIISPKKIQSCCFLYCFLISLRFFYFFIFNMDSSEAEQNQHCPKRTFEKYTKPKPDDSPLSDSDTPQNMDPRRYQLEVFEVAKKRNTIAVLDTGAGKTLIAVLLIKEIGQAIRSNGLKKVIIFLAPTVHLVNQQFKNIKHLTDFQVQEYYGAKGVDAWDLKIWEKEISDYDVLVMTPQILLDALRKAFLKVEVICLMIIDECHRATGNHPYAKIMKEFYHKANEKPKIFGMTASPVGKKGVSSTMDCRGQILDLESILDSQRYTVEDRTEIDVYIPSAKESCRYYDQAQFPALSLKPKIEALWSKSAALFSELQSSEQPNYKDVDNKLKSMRKRMSNELAKVLYCLEDLGLLCAYEAVKIWQENFSKVEGECEVYQKAYLQCKAFIDVVMQTVEESLQLDDNKTLEVQFDFSKGVNLGYLSPKLLELIKVIQSFGDSCTVLSLVFVERIITAKVIERFIKTVPQISHFTVSYLAGNSTSVGALTTKRQKEILDSFRSGKVNILFTTDVIEEGIHVPNCSCVIRFDLPKTLRSYVQSRGRSRQANSQFIVMLERGNMNQRNQLFDIIRSERSMSEAAIYKEHDSPSLRPIAQGKTEIYYVESTGASVTLDSSVSLLNRYCEKLPCDEYSRVKPTFEILPMEGCYQCKLTLPPNAAFQTIVGPSGKDVRLARHLACLEACKKLHQMGALNDHLVPFTEEPLEAEHSVKNKGSSSGAGTTRRKELHGTTSIHALCGTWDDKLDGAKFHAYRFDFTCNIVSEIYSGFVLLIESKLDDDVGNMELDLYLISKTVKASVSFCGQVSLNAEQMMNAKRFHELFFNGLFGKLVVWSKSSKRQREFLLQEDNTSLWSAINFYLLLPLEKLNDECKGSLEINWLGINSCVSAVDFLRKKFSVAAGNCEDDKKVTSPSPCDTNSSQVECNGKSEIHFANCVVDVNNIKNRVVLAAHTGRIYCILEADNNLSAESPFDGNDEKSPEKHITFSAYYKKRYGITLRHPGQPLLRLKQSHNAHNLLLNFHEEDDKDKSSHIGPANTKVPAIVNIPPELLCVLDVKRDILKSMYLLPSLMHRLESLMLSTQLREEIDGQTNKFNIPSSLILEALTTLRCCEKFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGHLSSKRSWAVCNSTLHKLGTDRKVQGYIRDSAFEPRRWVAPGQRSIHAVRCECGLDSREVPVDEKFHTEDPKVVVGKSCDTGHRWMCSKTISDCVEALIGAYYVSGGLIASLHVMKWLGIDAELEPSLVDEAITAASLHTYVPKMKEIEKLEKKIKFEFSVKGLLLEAITHMSGAELGIGSCYERLEFLGDSVLDLLITWHLYQNHQDIDPGELTDLRSASVNNDSFAQVSVRRNLYPHLQHSSGVLLGQILEYVTVISESESSTRSLPGIKAPKALGDLVESIAGAILIDTKLNLDEVWKVFNPLLSPIVTPDKLQLPPLRELIELCDSLGYFVKENCKRKGTTVHAELSVQLPNALLVQEGKGINKKIAKGDAAFRLLKDLEKKGISHGGSTSKRKRENLDQLRDSSHLETDISNCQSETKKRTKVDETNITGSASADLLPHKDSSEEVSDLDASIPVIESINMKKGGPRTTLYELCKKLQWPLPAFDSTEYKDRTLFESCEALEGCKGANCFVSTITLCIPNDCNVECEGEARSDKKSSFDSAAVEMLNKLQRLGKLKIGSHNLETCLLEAL* | 1730 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev08g0515 | 1729 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 439 | 600 | IPR001650 | - | |
Aev08g0515 | 1729 | SUPERFAMILY | PAZ domain | 949 | 1063 | IPR036085 | GO:0005515 | |
Aev08g0515 | 1729 | CDD | RIBOc | 1318 | 1468 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | CDD | RIBOc | 1108 | 1272 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | SMART | ultradead3 | 83 | 287 | IPR014001 | - | |
Aev08g0515 | 1729 | MobiDBLite | consensus disorder prediction | 1543 | 1564 | - | - | |
Aev08g0515 | 1729 | Pfam | Helicase conserved C-terminal domain | 458 | 556 | IPR001650 | - | |
Aev08g0515 | 1729 | MobiDBLite | consensus disorder prediction | 56 | 75 | - | - | |
Aev08g0515 | 1729 | Gene3D | paz domain | 937 | 1061 | - | - | |
Aev08g0515 | 1729 | SMART | riboneu5 | 1108 | 1281 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | SMART | riboneu5 | 1317 | 1470 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | Gene3D | Dicer dimerisation domain | 622 | 720 | IPR038248 | - | |
Aev08g0515 | 1729 | Pfam | PAZ domain | 950 | 1084 | IPR003100 | GO:0005515 | |
Aev08g0515 | 1729 | Pfam | Type III restriction enzyme, res subunit | 98 | 251 | IPR006935 | GO:0003677|GO:0005524|GO:0016787 | |
Aev08g0515 | 1729 | MobiDBLite | consensus disorder prediction | 718 | 737 | - | - | |
Aev08g0515 | 1729 | ProSiteProfiles | Ribonuclease III family domain profile. | 1302 | 1447 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | Gene3D | Ribonuclease III domain | 1090 | 1272 | IPR036389 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | Gene3D | Ribonuclease III domain | 1280 | 1467 | IPR036389 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | ProSiteProfiles | PAZ domain profile. | 951 | 1064 | IPR003100 | GO:0005515 | |
Aev08g0515 | 1729 | PANTHER | ENDORIBONUCLEASE DICER HOMOLOG 3 | 77 | 1714 | - | - | |
Aev08g0515 | 1729 | Gene3D | - | 1631 | 1710 | - | - | |
Aev08g0515 | 1729 | Gene3D | - | 81 | 320 | IPR027417 | - | |
Aev08g0515 | 1729 | SUPERFAMILY | RNase III domain-like | 1102 | 1279 | IPR036389 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | CDD | SF2_C_dicer | 435 | 567 | - | - | |
Aev08g0515 | 1729 | Pfam | Dicer dimerisation domain | 627 | 713 | - | - | |
Aev08g0515 | 1729 | ProSitePatterns | Ribonuclease III family signature. | 1338 | 1346 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | ProSiteProfiles | Double stranded RNA-binding domain (dsRBD) profile. | 1516 | 1539 | IPR014720 | - | |
Aev08g0515 | 1729 | ProSiteProfiles | Dicer double-stranded RNA-binding fold domain profile. | 627 | 717 | IPR005034 | GO:0016891 | |
Aev08g0515 | 1729 | PANTHER | DICER-RELATED | 77 | 1714 | - | - | |
Aev08g0515 | 1729 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 135 | 573 | IPR027417 | - | |
Aev08g0515 | 1729 | SMART | helicmild6 | 465 | 559 | IPR001650 | - | |
Aev08g0515 | 1729 | MobiDBLite | consensus disorder prediction | 1543 | 1604 | - | - | |
Aev08g0515 | 1729 | SMART | PAZ_2_a_3 | 923 | 1088 | IPR003100 | GO:0005515 | |
Aev08g0515 | 1729 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 94 | 251 | IPR014001 | - | |
Aev08g0515 | 1729 | CDD | DEXHc_dicer | 87 | 283 | - | - | |
Aev08g0515 | 1729 | MobiDBLite | consensus disorder prediction | 721 | 737 | - | - | |
Aev08g0515 | 1729 | Pfam | Ribonuclease III domain | 1126 | 1261 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | Pfam | Ribonuclease III domain | 1338 | 1446 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | ProSiteProfiles | Ribonuclease III family domain profile. | 1089 | 1261 | IPR000999 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | Gene3D | - | 433 | 593 | IPR027417 | - | |
Aev08g0515 | 1729 | SUPERFAMILY | RNase III domain-like | 1300 | 1466 | IPR036389 | GO:0004525|GO:0006396 | |
Aev08g0515 | 1729 | MobiDBLite | consensus disorder prediction | 56 | 86 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev08g0515 | Aev-Chr8 | 2880066 | 2889742 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev08g0515 | 483 | 556 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 39.189 | 2.79e-07 | 53.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev08g0515 | K11592 | - | gmx:100806831 | 2417.11 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev08g0515 | 08 | 2880066 | 2889742 | Aev08g0515 | 08 | 2880066 | 2889742 | ECH |