Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0515 ATGATTTTTTGCAACCTAAAACCTTTGATCGTGTCGCTGCCTCTGTTACCTATCATATCACCTAAAAAGATTCAATCTTGTTGCTTTCTTTATTGTTTTTTAATTTCTCTTCGATTTTTTTATTTTTTTATCTTCAACATGGATTCATCAGAGGCAGAGCAGAACCAACATTGTCCCAAGCGAACCTTCGAAAAATACACAAAGCCCAAACCTGATGATTCCCCGCTTTCTGACAGTGACACTCCCCAGAACATGGACCCCAGAAGGTATCAGTTAGAGGTATTTGAAGTAGCAAAGAAAAGGAACACAATAGCAGTGTTGGATACTGGTGCTGGCAAAACCTTGATAGCTGTTCTGCTTATAAAGGAAATTGGTCAAGCGATCAGGTCCAATGGCCTCAAGAAAGTCATCATTTTCTTAGCTCCCACTGTACATCTTGTCAATCAGCAATTTAAGAATATTAAACATCTTACAGATTTTCAAGTTCAGGAATATTATGGGGCTAAAGGAGTGGATGCATGGGATTTAAAGATATGGGAAAAGGAGATTAGTGACTATGATGTACTGGTTATGACACCCCAGATTCTTTTGGATGCATTAAGAAAGGCATTCCTGAAGGTAGAAGTGATATGCTTGATGATCATTGATGAATGCCACAGAGCAACTGGCAACCATCCCTATGCAAAAATAATGAAGGAATTCTATCACAAAGCTAATGAAAAGCCTAAGATTTTTGGGATGACAGCATCGCCAGTAGGTAAAAAAGGCGTTTCCTCTACTATGGATTGTCGGGGTCAGATATTGGACCTTGAAAGTATCTTGGATTCCCAGAGATATACTGTTGAGGATAGGACAGAGATAGATGTGTATATACCTTCTGCGAAAGAGAGTTGTAGATATTACGACCAAGCACAATTCCCCGCTTTGAGTTTGAAGCCAAAGATTGAAGCCTTGTGGTCTAAGTCTGCTGCATTGTTCTCTGAATTACAAAGCTCAGAACAACCAAACTATAAGGATGTGGACAATAAATTGAAGTCGATGCGTAAGCGGATGTCCAATGAACTTGCAAAAGTTTTATATTGCCTTGAAGATCTTGGACTCCTATGTGCTTATGAGGCTGTTAAAATATGGCAAGAGAATTTCTCCAAAGTTGAAGGAGAGTGTGAAGTTTATCAAAAAGCTTATCTTCAGTGTAAAGCCTTCATTGACGTAGTAATGCAAACAGTTGAAGAGTCCCTTCAACTTGATGATAACAAGACTCTGGAGGTTCAGTTTGATTTTTCAAAGGGAGTAAACTTGGGATATTTATCTCCCAAATTACTTGAACTTATTAAAGTCATCCAGTCCTTTGGAGACTCATGCACGGTATTGTCCCTCGTTTTTGTTGAAAGAATCATTACAGCCAAGGTGATTGAAAGATTTATAAAGACAGTTCCACAGATATCTCATTTCACAGTTTCGTATTTAGCCGGAAACAGTACATCAGTTGGTGCACTGACTACCAAGAGGCAGAAAGAGATATTGGATTCTTTCCGTTCTGGAAAGGTCAATATATTATTTACTACTGATGTCATTGAGGAAGGAATTCATGTGCCAAACTGCTCTTGTGTCATACGTTTTGACCTACCCAAAACACTTCGCAGTTATGTCCAATCTCGAGGAAGATCTAGGCAGGCTAACTCTCAATTTATTGTGATGTTGGAGAGGGGAAACATGAATCAAAGAAATCAACTTTTTGACATCATCAGGAGTGAGCGATCAATGTCTGAAGCAGCTATTTATAAAGAACATGATTCTCCGAGTTTAAGGCCGATCGCACAAGGGAAAACAGAGATATACTATGTTGAGTCTACTGGAGCATCGGTCACTTTGGACTCCAGTGTTAGTCTTTTGAATCGATATTGTGAAAAGCTACCATGTGATGAGTACTCCCGTGTAAAGCCAACTTTCGAGATCCTGCCTATGGAAGGGTGTTACCAGTGTAAGTTAACACTACCACCTAATGCAGCTTTCCAAACAATAGTTGGTCCCTCGGGAAAAGATGTTCGTTTGGCAAGGCATCTTGCTTGCTTAGAAGCTTGTAAGAAGCTACATCAAATGGGCGCCTTAAATGATCATCTTGTTCCGTTCACGGAAGAGCCTTTAGAAGCTGAACATAGTGTGAAAAACAAAGGATCAAGTTCAGGTGCAGGAACCACAAGAAGAAAGGAGTTACATGGCACGACCAGCATTCATGCATTGTGTGGTACATGGGATGACAAACTTGATGGAGCCAAATTTCATGCCTATAGATTTGATTTCACATGCAATATTGTCAGCGAAATTTACTCTGGATTTGTTCTCCTGATTGAGTCAAAGCTTGATGATGATGTTGGAAATATGGAATTAGATCTTTATTTGATCTCCAAAACTGTGAAGGCTTCTGTATCTTTCTGTGGGCAAGTTAGTTTAAATGCTGAGCAGATGATGAATGCAAAACGCTTTCATGAACTTTTCTTCAATGGTTTGTTTGGGAAATTGGTTGTTTGGTCCAAGTCATCAAAACGACAAAGGGAGTTTTTACTTCAGGAAGACAATACATCATTGTGGAGCGCAATAAACTTCTATTTGCTTCTACCGCTTGAGAAATTGAATGATGAATGTAAGGGGTCCTTGGAAATAAATTGGTTGGGAATAAATTCTTGTGTTTCTGCTGTTGATTTTTTAAGGAAGAAGTTTTCGGTGGCTGCTGGAAATTGTGAGGATGACAAAAAAGTCACATCACCTAGTCCTTGTGATACCAATTCTTCACAGGTGGAATGTAACGGCAAAAGCGAGATTCATTTTGCTAATTGTGTGGTTGATGTTAATAATATAAAGAATAGGGTAGTTTTGGCCGCTCACACTGGGAGAATATATTGTATTCTTGAAGCAGATAATAATCTATCTGCTGAAAGTCCTTTCGACGGAAACGATGAAAAGTCTCCGGAGAAACATATTACCTTCTCTGCTTACTACAAGAAAAGGTATGGGATTACACTGAGACATCCAGGACAGCCTTTGTTACGTTTGAAGCAAAGTCATAACGCTCACAATCTTCTTTTGAATTTCCATGAGGAAGATGATAAGGACAAGTCATCACACATTGGCCCTGCAAACACAAAAGTGCCTGCAATTGTTAACATTCCACCTGAGCTTTTATGTGTGCTTGATGTTAAAAGAGATATTTTGAAGTCAATGTACTTGCTACCATCACTGATGCATCGTCTTGAATCCCTCATGTTGTCTACTCAGCTTAGAGAAGAGATAGATGGTCAGACTAACAAGTTCAACATACCTAGCTCTCTGATTCTAGAAGCACTCACAACTTTAAGATGTTGTGAAAAATTTTCTATGGAACGTCTTGAGTTGCTAGGAGATTCGGTTCTAAAATATGCGGTGAGCTGTCACCTGTTTCTTAAGTATCCTAAGAAACATGAAGGACATTTATCTTCCAAACGGTCATGGGCTGTTTGTAATTCAACCCTGCATAAACTGGGAACAGATCGCAAAGTACAGGGATATATCCGAGACTCTGCATTTGAACCACGCCGTTGGGTTGCCCCAGGACAGCGCTCTATACATGCTGTTCGTTGTGAGTGTGGGTTGGACTCCCGAGAAGTCCCTGTAGATGAAAAATTCCATACGGAAGATCCAAAAGTAGTGGTTGGGAAGTCCTGTGACACGGGCCACCGCTGGATGTGTTCAAAGACAATTTCCGATTGTGTTGAAGCTCTAATAGGAGCATACTATGTGAGCGGTGGGCTGATTGCTTCGCTACATGTGATGAAGTGGCTTGGGATTGATGCTGAACTAGAGCCATCCTTGGTCGATGAAGCCATCACTGCAGCATCACTCCATACATATGTACCAAAGATGAAAGAGATTGAAAAACTCGAGAAGAAAATTAAGTTTGAATTTTCTGTTAAGGGTCTCTTGTTGGAGGCAATCACACATATGTCTGGGGCGGAACTTGGGATTGGCTCCTGTTATGAGAGGCTTGAATTTCTTGGTGACTCCGTGTTAGATCTTCTCATCACGTGGCATCTTTATCAGAACCATCAAGATATTGATCCAGGAGAGTTGACTGACTTGCGTTCTGCTTCCGTCAATAATGATAGTTTTGCTCAAGTTTCTGTTAGGCGAAACCTTTACCCGCATCTTCAGCATAGCTCAGGAGTGTTACTGGGCCAGATATTGGAATATGTTACGGTCATTTCTGAATCAGAGAGCTCCACAAGATCACTTCCAGGCATCAAAGCTCCCAAGGCACTTGGAGATCTAGTGGAAAGTATTGCTGGGGCTATACTAATAGATACCAAGCTCAATCTTGATGAAGTGTGGAAAGTTTTCAATCCTCTATTATCTCCCATTGTTACTCCTGACAAACTTCAGTTGCCTCCACTGCGGGAACTAATTGAACTATGCGACTCTCTTGGGTATTTTGTTAAAGAAAATTGTAAAAGGAAGGGGACTACGGTGCATGCCGAGCTTAGTGTACAGCTGCCAAATGCCCTCTTAGTTCAAGAGGGAAAGGGGATAAACAAAAAAATAGCAAAAGGAGATGCAGCATTTCGTTTGTTGAAGGATCTTGAGAAGAAGGGAATTTCACATGGTGGTAGCACGTCGAAGAGAAAAAGAGAGAATCTTGACCAACTTCGCGATTCATCTCATCTCGAAACAGATATTAGTAATTGCCAGAGTGAAACTAAGAAAAGGACAAAAGTTGATGAAACTAACATAACTGGAAGTGCATCTGCCGATTTGTTGCCGCACAAGGACTCTTCCGAGGAAGTCTCTGATCTTGATGCTTCCATTCCAGTTATTGAATCTATCAACATGAAGAAGGGAGGGCCCAGAACCACACTATATGAACTGTGCAAGAAATTACAATGGCCGTTGCCTGCATTTGATTCAACAGAATACAAAGACAGAACTCTTTTCGAGTCTTGCGAGGCCCTGGAAGGATGCAAAGGAGCTAACTGTTTTGTGTCGACAATTACCTTGTGCATACCGAATGATTGTAACGTAGAATGCGAAGGAGAAGCTAGAAGTGATAAGAAGAGCTCATTTGACTCTGCTGCAGTTGAAATGCTTAATAAGCTGCAACGACTGGGAAAACTTAAGATTGGTTCCCATAACTTGGAAACATGTTTATTGGAAGCATTGTAA 5190 0.4056 MIFCNLKPLIVSLPLLPIISPKKIQSCCFLYCFLISLRFFYFFIFNMDSSEAEQNQHCPKRTFEKYTKPKPDDSPLSDSDTPQNMDPRRYQLEVFEVAKKRNTIAVLDTGAGKTLIAVLLIKEIGQAIRSNGLKKVIIFLAPTVHLVNQQFKNIKHLTDFQVQEYYGAKGVDAWDLKIWEKEISDYDVLVMTPQILLDALRKAFLKVEVICLMIIDECHRATGNHPYAKIMKEFYHKANEKPKIFGMTASPVGKKGVSSTMDCRGQILDLESILDSQRYTVEDRTEIDVYIPSAKESCRYYDQAQFPALSLKPKIEALWSKSAALFSELQSSEQPNYKDVDNKLKSMRKRMSNELAKVLYCLEDLGLLCAYEAVKIWQENFSKVEGECEVYQKAYLQCKAFIDVVMQTVEESLQLDDNKTLEVQFDFSKGVNLGYLSPKLLELIKVIQSFGDSCTVLSLVFVERIITAKVIERFIKTVPQISHFTVSYLAGNSTSVGALTTKRQKEILDSFRSGKVNILFTTDVIEEGIHVPNCSCVIRFDLPKTLRSYVQSRGRSRQANSQFIVMLERGNMNQRNQLFDIIRSERSMSEAAIYKEHDSPSLRPIAQGKTEIYYVESTGASVTLDSSVSLLNRYCEKLPCDEYSRVKPTFEILPMEGCYQCKLTLPPNAAFQTIVGPSGKDVRLARHLACLEACKKLHQMGALNDHLVPFTEEPLEAEHSVKNKGSSSGAGTTRRKELHGTTSIHALCGTWDDKLDGAKFHAYRFDFTCNIVSEIYSGFVLLIESKLDDDVGNMELDLYLISKTVKASVSFCGQVSLNAEQMMNAKRFHELFFNGLFGKLVVWSKSSKRQREFLLQEDNTSLWSAINFYLLLPLEKLNDECKGSLEINWLGINSCVSAVDFLRKKFSVAAGNCEDDKKVTSPSPCDTNSSQVECNGKSEIHFANCVVDVNNIKNRVVLAAHTGRIYCILEADNNLSAESPFDGNDEKSPEKHITFSAYYKKRYGITLRHPGQPLLRLKQSHNAHNLLLNFHEEDDKDKSSHIGPANTKVPAIVNIPPELLCVLDVKRDILKSMYLLPSLMHRLESLMLSTQLREEIDGQTNKFNIPSSLILEALTTLRCCEKFSMERLELLGDSVLKYAVSCHLFLKYPKKHEGHLSSKRSWAVCNSTLHKLGTDRKVQGYIRDSAFEPRRWVAPGQRSIHAVRCECGLDSREVPVDEKFHTEDPKVVVGKSCDTGHRWMCSKTISDCVEALIGAYYVSGGLIASLHVMKWLGIDAELEPSLVDEAITAASLHTYVPKMKEIEKLEKKIKFEFSVKGLLLEAITHMSGAELGIGSCYERLEFLGDSVLDLLITWHLYQNHQDIDPGELTDLRSASVNNDSFAQVSVRRNLYPHLQHSSGVLLGQILEYVTVISESESSTRSLPGIKAPKALGDLVESIAGAILIDTKLNLDEVWKVFNPLLSPIVTPDKLQLPPLRELIELCDSLGYFVKENCKRKGTTVHAELSVQLPNALLVQEGKGINKKIAKGDAAFRLLKDLEKKGISHGGSTSKRKRENLDQLRDSSHLETDISNCQSETKKRTKVDETNITGSASADLLPHKDSSEEVSDLDASIPVIESINMKKGGPRTTLYELCKKLQWPLPAFDSTEYKDRTLFESCEALEGCKGANCFVSTITLCIPNDCNVECEGEARSDKKSSFDSAAVEMLNKLQRLGKLKIGSHNLETCLLEAL* 1730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0515 1729 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 439 600 IPR001650 -
Aev08g0515 1729 SUPERFAMILY PAZ domain 949 1063 IPR036085 GO:0005515
Aev08g0515 1729 CDD RIBOc 1318 1468 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 CDD RIBOc 1108 1272 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 SMART ultradead3 83 287 IPR014001 -
Aev08g0515 1729 MobiDBLite consensus disorder prediction 1543 1564 - -
Aev08g0515 1729 Pfam Helicase conserved C-terminal domain 458 556 IPR001650 -
Aev08g0515 1729 MobiDBLite consensus disorder prediction 56 75 - -
Aev08g0515 1729 Gene3D paz domain 937 1061 - -
Aev08g0515 1729 SMART riboneu5 1108 1281 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 SMART riboneu5 1317 1470 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 Gene3D Dicer dimerisation domain 622 720 IPR038248 -
Aev08g0515 1729 Pfam PAZ domain 950 1084 IPR003100 GO:0005515
Aev08g0515 1729 Pfam Type III restriction enzyme, res subunit 98 251 IPR006935 GO:0003677|GO:0005524|GO:0016787
Aev08g0515 1729 MobiDBLite consensus disorder prediction 718 737 - -
Aev08g0515 1729 ProSiteProfiles Ribonuclease III family domain profile. 1302 1447 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 Gene3D Ribonuclease III domain 1090 1272 IPR036389 GO:0004525|GO:0006396
Aev08g0515 1729 Gene3D Ribonuclease III domain 1280 1467 IPR036389 GO:0004525|GO:0006396
Aev08g0515 1729 ProSiteProfiles PAZ domain profile. 951 1064 IPR003100 GO:0005515
Aev08g0515 1729 PANTHER ENDORIBONUCLEASE DICER HOMOLOG 3 77 1714 - -
Aev08g0515 1729 Gene3D - 1631 1710 - -
Aev08g0515 1729 Gene3D - 81 320 IPR027417 -
Aev08g0515 1729 SUPERFAMILY RNase III domain-like 1102 1279 IPR036389 GO:0004525|GO:0006396
Aev08g0515 1729 CDD SF2_C_dicer 435 567 - -
Aev08g0515 1729 Pfam Dicer dimerisation domain 627 713 - -
Aev08g0515 1729 ProSitePatterns Ribonuclease III family signature. 1338 1346 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1516 1539 IPR014720 -
Aev08g0515 1729 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 627 717 IPR005034 GO:0016891
Aev08g0515 1729 PANTHER DICER-RELATED 77 1714 - -
Aev08g0515 1729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 573 IPR027417 -
Aev08g0515 1729 SMART helicmild6 465 559 IPR001650 -
Aev08g0515 1729 MobiDBLite consensus disorder prediction 1543 1604 - -
Aev08g0515 1729 SMART PAZ_2_a_3 923 1088 IPR003100 GO:0005515
Aev08g0515 1729 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 94 251 IPR014001 -
Aev08g0515 1729 CDD DEXHc_dicer 87 283 - -
Aev08g0515 1729 MobiDBLite consensus disorder prediction 721 737 - -
Aev08g0515 1729 Pfam Ribonuclease III domain 1126 1261 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 Pfam Ribonuclease III domain 1338 1446 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 ProSiteProfiles Ribonuclease III family domain profile. 1089 1261 IPR000999 GO:0004525|GO:0006396
Aev08g0515 1729 Gene3D - 433 593 IPR027417 -
Aev08g0515 1729 SUPERFAMILY RNase III domain-like 1300 1466 IPR036389 GO:0004525|GO:0006396
Aev08g0515 1729 MobiDBLite consensus disorder prediction 56 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0515 Aev-Chr8 2880066 2889742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0515 483 556 Eukaryotic Initiation Factors Gene Family AT3G19760 39.189 2.79e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0515 K11592 - gmx:100806831 2417.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0515 08 2880066 2889742 Aev08g0515 08 2880066 2889742 ECH