Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0489 ATGGAAGGTGGTGGTGCGTACAACCCCCGAACGGTTGAGGAAGTCTTCAGGGATTTCAAAGGCCGCAGAGCCGCCATGATTAAGGCCCTCACCAGCGATGTTGAAGAGTTCTATCAGCAGTGTGATCCTGAGAAGGAAAATCTTTGCCTTTATGGATTTCCTAGTGAGCATTGGGAAGTCAATCTGCCTGCTGAAGAGGTGCCTCCAGAGCTTCCAGAGCCGGCATTGGGTATTAACTTTGCCAGGGACGGGATGCAAGAAAAGGACTGGCTGTCTTTGGTAGCTGTCCACAGTGATGCGTGGTTACTTGCCGTGGCTTTTTATTTTGGTGCTAGGTTTGGATTTGATAAGGCTGATAGGAAGCGACTGTTTAATATGATAAATGATCTTCCAACAATATTTGAAGTTGTTTCAGGGATGGCCAAGAAGCAAGGAAAGGAAAAGTCATCAGTTTCTAATCATAGCAGTACCAAATCCAAATCCAACTCTAAGAAAGGATCTGAATCTCAAGTGAAACAGGCAAAAGCGATGCAATCAAAGGATGTCAACGCCAGTGCCAATGTCAATGAGGATGGTTTGGAAGAGGAGGATGAGGAGCATGGAGAGACTCTGTGTGGGGCATGTGGAGAGAACTATGCGTCGGACGAGTTCTGGATATGCTGCGACATATGTGAGAAGTGGTTCCATGGAAAGTGTGTGAAGATTACGCCTGCGAGGGCTGAGCATATCAAGCAGTACAAATGTCCATCCTGCAGCAACAAGAGAGCTCGACCTTGA 777 0.471 MEGGGAYNPRTVEEVFRDFKGRRAAMIKALTSDVEEFYQQCDPEKENLCLYGFPSEHWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADRKRLFNMINDLPTIFEVVSGMAKKQGKEKSSVSNHSSTKSKSNSKKGSESQVKQAKAMQSKDVNASANVNEDGLEEEDEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0489 258 Pfam PHD-finger 205 254 IPR019787 -
Aev08g0489 258 Pfam Alfin 11 138 IPR021998 GO:0006355|GO:0042393
Aev08g0489 258 ProSiteProfiles Zinc finger PHD-type profile. 202 254 IPR019787 -
Aev08g0489 258 CDD PHD_AL_plant 204 254 IPR044104 -
Aev08g0489 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 195 253 IPR013083 -
Aev08g0489 258 SMART PHD_3 204 252 IPR001965 -
Aev08g0489 258 MobiDBLite consensus disorder prediction 150 186 - -
Aev08g0489 258 PANTHER CPG BINDING PROTEIN 3 258 IPR045104 GO:0006355|GO:0042393
Aev08g0489 258 SUPERFAMILY FYVE/PHD zinc finger 194 255 IPR011011 -
Aev08g0489 258 MobiDBLite consensus disorder prediction 144 195 - -
Aev08g0489 258 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1 3 258 - -
Aev08g0489 258 ProSitePatterns Zinc finger PHD-type signature. 205 251 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0489 Aev-Chr8 2755966 2758266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0489 1 257 Alfin-like Transcription Factor Family AT3G42790 71.756 1.40e-126 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Aev08g0489 Alfin 4.8e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0489 - - rcu:8258558 443.351