Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0488 ATGAGTTTAAGCGCAGCAGAGGATGATTCTTCTTCTGAGATTCACCTTCCAGCAGAGATAGATTGGCACATGCTCGACAAGTCCAAGTTTTTCTTCCTTGGCGCCGCCTTATTCTCCGGCGTCTCCGCTGCCCTATATCCCATGGTCGTGTTGAAGACGCGCCAGCAAGTTTCTTCAGCACAGTACTCATGCCTCAACATGTCTTGTGCCATTATGCGCTACGAAGGATTCAGAGGTTTCTACAAAGGTTTTGGAACTTCCCTTATGGGAACCATCCCTGCTCGTGCACTCTACATGGCTTCTCTCGAAATCACCAAGAGCAATGTTGGCACTGGCCTCATTGATTTGGGTTTCTCTGATACCACTGCCACTGCTGTAGCTAATGCTGCAGCTGGTGTTACCTCTGCTATGGCTGCACAATTGGTATGGACCCCAATTGATGTTGTGAGCCAGAGACTCATGGTTCAAGGATGTAGTAGCAACAGCAGTGGAGGCACAAGCATACTCAGAAATCTTAACTCTGAGAACTACAGGAATGGTTTTGATGCATTCAGGAAAATTCTGTGTGCTGATGGGGCTAGAGGGTTCTATAGGGGGTTTGGTATTTCAATATTGACTTATGCGCCATCCAATGCGGTTTGGTGGACTTCATATTCTATGGTCCATAGGGTCATATGGGGTGGTTTTGGTTGCTACATGTGTAAGAAGGATGAGGGGAATTTGGCCAATGGGTGTGGTTATAAGCCTGATTCAAGGGCAATGGTGGGTGTACAAGGGCTTAGTGCAGTTGTGGCAAGTGGGGTCTCAGCAATTGTGACTATGCCTCTGGATACAATCAAGACAAGGTTGCAGGTGTTGGATTCAGAGGAGAATGGGCGCAGAAAGCCCTTAACCTTAGTTCAGACAATTCGGAATCTGGTTAAGGAAGGTGGTTTAGTTGCTTGTTACAGAGGGTTGGGGCCAAGGTGGGCTTCAATGTCCATGTCTGCAACAACCATGATTACTACTTATGAGTTCTTGAAGCGGTTGTCTACCAAGAGTCAAGAAAAATTGACTCCATAA 1062 0.4689 MSLSAAEDDSSSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSAQYSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMASLEITKSNVGTGLIDLGFSDTTATAVANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGCSSNSSGGTSILRNLNSENYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRVIWGGFGCYMCKKDEGNLANGCGYKPDSRAMVGVQGLSAVVASGVSAIVTMPLDTIKTRLQVLDSEENGRRKPLTLVQTIRNLVKEGGLVACYRGLGPRWASMSMSATTMITTYEFLKRLSTKSQEKLTP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0488 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 224 IPR018108 -
Aev08g0488 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Aev08g0488 353 Gene3D Mitochondrial carrier domain 28 352 IPR023395 -
Aev08g0488 353 Pfam Mitochondrial carrier protein 258 347 IPR018108 -
Aev08g0488 353 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Aev08g0488 353 Pfam Mitochondrial carrier protein 124 225 IPR018108 -
Aev08g0488 353 PRINTS Mitochondrial carrier protein signature 262 284 IPR002067 GO:0055085
Aev08g0488 353 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Aev08g0488 353 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Aev08g0488 353 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 350 - -
Aev08g0488 353 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 350 - -
Aev08g0488 353 SUPERFAMILY Mitochondrial carrier 23 340 IPR023395 -
Aev08g0488 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 343 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0488 Aev-Chr8 2752366 2753427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0488 1 349 Chloroplast and Mitochondria Gene Families AT1G72820 65.909 2.31e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0488 K15121 - gmx:100784202 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0488 08 2752366 2753427 Aev08g0488 08 2752366 2753427 ECH