Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0470 ATGTCTGGAACAACGACCTCTGTTCCTGAAATGAAGGGAATCAGAGTGAAGCTAGAAGAGACACTAACATGTGCAGCAGCTGGTTCATCTTCTTCTTCTTCTCCTTCAAGCCACTCACCACAGCCCATGGAGGGGCTTCACGAGGTGGGTCCACCCCCATTCCTCACAAAGACATTCGAAGTTGTGGAAGATCCTTCCACTGACCCCATTGTTTCATGGAGCAGAGCACGCAACAGCTTCATCGTCTGGGACTCTCACAAGTTCTCCACCACCATCTTGCCTCGTTACTTCAAGCACAACAACTTCTCCAGCTTCGTTCGACAACTCAACACATATGGGTTTAGGAAAGTTGATCCAGATCGATGGGAATTTGCGAACGAAGGGTTTTTAGCAGGGCAGAGGAACTTGTTGAAGACGATCAAGAGAAGGAGGAATGTGTCACAGTCACAAGGTGTGATACAACACGGAGGAGGTGGGACTTGTGTTGAATTGGGGGAGTACGGTCTTGAAGGTGAGCTTGAAAGGTTAAGGAGAGACAGAACAGTGTTAATGGCGGAAATCGTGAAGCTGAGGCACCAACAACACAATTCAAGGGAGCAACTTTGTTCCATGGAGACAAGGTTGCAAACAACAGAGAAGAAACAGCAACAGATGATGACATTCCTCGCCAAGGCACTCAACAACCAATCCTTCATACAGCAATTCGCACATAGGAATGCTCAGAACAGAGGAGTGCAGGGTGTTGAGATAAGCAGAAAGAGGAGACTAACAGCTACCCCTAGTGTTGAGAATCTGCAACAGGATCCTGTTCCTGTTGTTGAATCAGTTGTGGAGTTTCAAGATCAAGAGGAATTGGCGAGTATTGAGTCTGAGATGGAGACACTTTTCTCCGGTGCTTGTGATGATGAATCAAGCAGTGAAATCAAGGACCCTGCAATCACCAGAGGGGCTAATTTGAGTTCAATGGGTGATGCTATGTGGGAGGATTTGCTGAGTGAAGATTTGGTAGCTGGGAATCCAGAGGATGAGGTTATAATTGGTGATTATCCACAGGTTGATGCTCCAGTGGAGGATTTGGCTCAAAAGGGAAGTGATTGGTCTGAGGATTTGCAGAATCTTGTTGATCATATGGGTTATCTTGGCTCAAAACCATAA 1155 0.4658 MSGTTTSVPEMKGIRVKLEETLTCAAAGSSSSSSPSSHSPQPMEGLHEVGPPPFLTKTFEVVEDPSTDPIVSWSRARNSFIVWDSHKFSTTILPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLAGQRNLLKTIKRRRNVSQSQGVIQHGGGGTCVELGEYGLEGELERLRRDRTVLMAEIVKLRHQQHNSREQLCSMETRLQTTEKKQQQMMTFLAKALNNQSFIQQFAHRNAQNRGVQGVEISRKRRLTATPSVENLQQDPVPVVESVVEFQDQEELASIESEMETLFSGACDDESSSEIKDPAITRGANLSSMGDAMWEDLLSEDLVAGNPEDEVIIGDYPQVDAPVEDLAQKGSDWSEDLQNLVDHMGYLGSKP* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0470 384 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 28 335 IPR027725 -
Aev08g0470 384 Pfam HSF-type DNA-binding 54 143 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev08g0470 384 SUPERFAMILY "Winged helix" DNA-binding domain 50 143 IPR036390 -
Aev08g0470 384 MobiDBLite consensus disorder prediction 25 50 - -
Aev08g0470 384 PRINTS Heat shock factor (HSF) domain signature 54 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev08g0470 384 PRINTS Heat shock factor (HSF) domain signature 105 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev08g0470 384 PRINTS Heat shock factor (HSF) domain signature 92 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev08g0470 384 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 28 335 - -
Aev08g0470 384 MobiDBLite consensus disorder prediction 25 41 - -
Aev08g0470 384 Gene3D - 47 144 IPR036388 -
Aev08g0470 384 SMART hsfneu3 50 143 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev08g0470 384 Coils Coil 173 193 - -
Aev08g0470 384 ProSitePatterns HSF-type DNA-binding domain signature. 93 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0470 Aev-Chr8 2649351 2650601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0470 21 384 HSF AT2G26150 53.973 1.58e-131 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev08g0470 HSF_DNA-bind 8.1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0470 K09419 - gmx:100794605 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0470 08 2649351 2650601 Aev08g0470 08 2649351 2650601 ECH
Aev07g1017 07 7573508 7576080 Aev08g0470 08 2649351 2650601 PCT