Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0433 ATGAGTGATCTTGAAAATGCCATGGGGCTTCAACATGAAAAAAGTGGCATTCTGAATTGTCCTTCATCGGTTTTGAGGACAAGTGGTTCAGAAATGGCAAATAATTCTGTGTCCATGTCTGATGAGCCTTCAAATGTAGCTAATCCCTTTCTTGCTTCCTCTGCTTGGGATCCACTTGTTTCCTTAAACCAGGTTCAATCTTTTGTAGGCACTACTCCAATGGTTTCTCATAGTGACTTTTCCAATTCATTGTACCCTCCTCCTCTTGTCATGGAGAATAATCACCAGGGAATGAGCACCAATTCTCATCATCATCTTGTTCAATACATGTCTGACTCAAATTTTGGGGACATTGTCCCCAAGGTTCAACTTCAACCCTATGGAAGTGGAAGCTTCTCAGAAATGGTTGGCACCTTTGTCCAACCTGGCTCTGGTGGTATAGCTAACACAGGGTATCTGCCAAATTATAATCCGAGCAATGAAGTAGGAATTGAAAGGGGTCAAATAAATAATGAGCATTCTCAGGGTCAGGGAGAAGCTTCAATTGCTCAAGAGGGAGACCAAGGATCAGCACCTACTTGTGAAAATACAAGAAAGCGAGGGCTTGATTATAATTCTACTCTCAGTCCAAACAAGAATGTTGAGGGGGATGTGATTAAAGATTGTTCTGGGAAGAGTTCTGATGGTATGAAAGAACATGGTGAAAAGAAACCAAAAATGGAACAAGATACTAGTCCGCCGGTGCAGGGTAAGCAATCGGCGAAGCAAAGTAAAGATAACTCTCACAGTGGAGAGGCTCCTAAAGAAAATTTTGTTCATGTGAGAGCCAGAAGAGGCCAAGCTACAAACAGTCATAGCCTAGCAGAAAGGGTAAGGAGAGAAAAGATCAGTGAGCGAATGAGGGTGCTTCAAGAACTTGTTCCTGGATGCAACAAGATAACTGGCAAAGCTGTAATGCTTGATGAGATTATAAACTATGTGCAATCATTGCAACAGCAGGTTGAGTTTTTGTCCATGAAACTTGCCACTGTAAATCCAGAACTGAACATTGACCTAGAGCGGATCCTCTCCAAAGATATTCTCCAATCACGGGTTGGACATGGACCTATTGGTGGTTATGGTTCTGGTAGTATCAACTGCTCTCAACCATTCACCGCAGCAAGTTACCAAGGAACACTAGTCGGCATGGCCGGCACATCTGCTCAACTCCCTCCTTTGCCACAGGCTGTTATAGACCACGAGTTCCAAAGCTTATACGGAATGAGCTACGATTCTAATGCAGTTCTTGACAATATGGGACCTAATAATGGACGTTTGAAATCAGAGCTATAA 1332 0.4294 MSDLENAMGLQHEKSGILNCPSSVLRTSGSEMANNSVSMSDEPSNVANPFLASSAWDPLVSLNQVQSFVGTTPMVSHSDFSNSLYPPPLVMENNHQGMSTNSHHHLVQYMSDSNFGDIVPKVQLQPYGSGSFSEMVGTFVQPGSGGIANTGYLPNYNPSNEVGIERGQINNEHSQGQGEASIAQEGDQGSAPTCENTRKRGLDYNSTLSPNKNVEGDVIKDCSGKSSDGMKEHGEKKPKMEQDTSPPVQGKQSAKQSKDNSHSGEAPKENFVHVRARRGQATNSHSLAERVRREKISERMRVLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNIDLERILSKDILQSRVGHGPIGGYGSGSINCSQPFTAASYQGTLVGMAGTSAQLPPLPQAVIDHEFQSLYGMSYDSNAVLDNMGPNNGRLKSEL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0433 443 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 280 330 IPR011598 GO:0046983
Aev08g0433 443 MobiDBLite consensus disorder prediction 245 260 - -
Aev08g0433 443 MobiDBLite consensus disorder prediction 218 242 - -
Aev08g0433 443 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 443 - -
Aev08g0433 443 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 278 347 IPR036638 GO:0046983
Aev08g0433 443 Gene3D - 277 352 IPR036638 GO:0046983
Aev08g0433 443 SMART finulus 286 336 IPR011598 GO:0046983
Aev08g0433 443 MobiDBLite consensus disorder prediction 172 272 - -
Aev08g0433 443 MobiDBLite consensus disorder prediction 172 213 - -
Aev08g0433 443 Pfam Helix-loop-helix DNA-binding domain 283 331 IPR011598 GO:0046983
Aev08g0433 443 CDD bHLH_AtBPE_like 270 355 - -
Aev08g0433 443 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 11 443 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0433 Aev-Chr8 2401387 2403659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0433 47 443 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 43.750 2.31e-77 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g0433 HLH 3.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0433 - - gmx:100801930 513.072