Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0421 ATGCCTCTGTATCAAGAGAAGCTCCATGTGTGTAAAGCCACTGGAATCGGACTCGCTGAGAAAATGGATCTGAAGATGCTGATTGAGGAGTTAGCTGAGTCAATCGTTGATGATGTTCCCTCTGTTTTCATCTGCCCAATCTCACTGGAGCCGATGCAAGACCCAGTCACCCTCTGCACTGGCCAAACCTACGACAGGACCAACATCCTCAAATGGTTCTCCCTCGGCCACAAAACCTGTCCCACAACAATGCAGGACCTTTGGGACGATTCCCTCACGCCCAACACCACCCTCAGCCGCTTCATCCTCACCTGGTTCTCACAGAAGTACCTGGCCATGAAGAAGAAGTTCGAGGATGTGCAAGGCAGAGCCTTGGAGATCTTGGACACGCTCAAGAAGGTCAAGGGTCAAGCCAGAGTTCAAGCTCTCAAGGAACTTCGCCATCTTGTCGATACACGCGCCTCAATAAGGAAGACGGTTCAAGAAAATGGTGGCCTTGATTTGGTTTCTTCTCTACTGGGTCCTTTCACTTCCCATGCTGTTGGGTCGGAAGCCATCGGGATCCTTGTGAATTTGGATTTGAGTTCTGAGCTGAAGAAAAAATTGATGCATCCGGCGAAGATGTCACTTCTGGTGGATATCATGAACGAGGGAACCATTGAGACGAAGATGAACTGTGCAAGATTGATTGAAATGTTGTTGATGGAAGGGAATTTCTCAGAAGCTGTCTCAAGCTTGAGCCTTTTGGTTGGTTTGTTAAGGTTGGTGAGGGATAAGAAGCACCCAAACGGGGTCTTAAATGGACTCATATTGCTCAAAATAATTGCTTGTTCTGGTGAATCGGTTAGAAGGTCCATTATAAGCATAGGAGCAGTGCCTCAATTAATTGAGCTTTTGCCCATTTTGAATGATGAGTGTTTAGAGATAGCACTGTATGTTCTTGAGGTGCTGTCAACCATTCCAGAGGGAAGAGTGGCTTTGAAAGAGTGCCCAAACATTATACCCAATGTGGTCAAGTTGCTGATGAGGGTTTCTGAGAGCTGCACGCAATTCGCCTTGTCCATACTGTGGGCTATTTACAAGCTCGCGCCGGAGGAATGTGCTTCCAAGGCTGTGGAAGCAGGGTTGGCGGCCAAGTTGCTTCTGGTCATTCAGAGTGGTTGCAACCCGGTGTTGAAGCAGATGTCTTCTGAGTTCTTGAAAATGTGTAGTTTGAATTACTCTACTAGTATTTTGATTTCAAAGTATTGGTACAAGGGCAAGAAGCCAAAAATAAACCAGAGAACAAAAAGAGTAAAGCTGCACACGTGGCTGGCTGGATTTGCTGGTTGGGGAACCATGTCCTCATGGCTGGCTCGCTCCTTGGCAGATTCACTCCGATTAGATGGCGACGAAAACGATCTTGTGTCCGACCCTACGTCACCAAGAAGCCACCCTCCTCAACACCAACCACAAGACAATAATAATAATAATGCGGTTGTTGGATCAGAGCAAGAAGAAGAAGAAGCGCAAGGGCATGGGCGCGGAGTAAAGGAAGATCTCGACGAAATCAAGCAAACCCTAACACGCCAATTCTGGGGAATGGCCTCCTTCCTCGCTCCTCCACCCCCCACTTCTCATCCTTCATCTCCACCGCCTCATTCTCATTCTTCATCTCCACCTTCTCGCTCTGACCCTAACTCTTTCCCGCCGAATCAGCAGCAATATCATGTACAGGACGCTGCGATTCGCGATCAATCTGGGAGGGACTGTTCGGTCGCGGAACAGGAAAGAGTTCACGCGAATGACTCCGGCTCGATCGGATCCGATTCGGAATTGGATCGGGAACCGGAAATGGAGGAATATGATCTTGAACGCGCCGTTGGAATCACCGAGGAGGTTTTGTCCTTCGCCATGAACATCGGAAAGCATCCCGAGACTTGGTTGGATTTTCCTATTGACGAAGAAGATGACCCCCAGGATTTCGATATGTCTGATGCCCAAGAGGAGCATGCTTTGGTCATTGAGAGACTCACTCCTAGATTGGCTGCGCTCAGAATTGAGCTTTGTCCTTGCCATATGAGTGAAAGCTACTTCTGGAAAGTCTATTTTGTGCTTTTGCATTCCAGGCTTAACAAACATGATGCTGCCATTTTATCTACACCTCAGGTGATGGAAGCCAGAGCAATGTGGATGAAGGAGTTGCACAAACAAATTAAGCCTGAATTTGAATATTTTGGAAGAAGCGGTGCCTACTCAAGAGGCACTGCTCAGCGTGATGATTTTGCTCCCAGCTTATTGGATGATGCCTATTCTGATGACATTACTCCTCGGACATATGGATCTGAAACAACCTCTTCGTCCATGCTAGCAGATAATGAGACAGTGAAGCATACAGTTGAAAGTTCTGAAACCCGTTTCATTGATAAGTCTATTATTGAGGAAAAACCAATTATTAAAACCGAGATCAAGGATCTAAAGTGTAGTCGATCCTCGCACATTATTATTCAGGACTATGACGACGATGATGTTGATTGGCCAGAGGAAGATTCTGATTTAGGGGGAATGACTCTTCCCATCGTGAATGAAGAGGACATATCTTTCAGTGACCTCGAGGATGATGATTATGGCATTAAACCTGTTGGTTGTAATACAAGTTCGAAGGTGGTGTAA 2652 0.4679 MPLYQEKLHVCKATGIGLAEKMDLKMLIEELAESIVDDVPSVFICPISLEPMQDPVTLCTGQTYDRTNILKWFSLGHKTCPTTMQDLWDDSLTPNTTLSRFILTWFSQKYLAMKKKFEDVQGRALEILDTLKKVKGQARVQALKELRHLVDTRASIRKTVQENGGLDLVSSLLGPFTSHAVGSEAIGILVNLDLSSELKKKLMHPAKMSLLVDIMNEGTIETKMNCARLIEMLLMEGNFSEAVSSLSLLVGLLRLVRDKKHPNGVLNGLILLKIIACSGESVRRSIISIGAVPQLIELLPILNDECLEIALYVLEVLSTIPEGRVALKECPNIIPNVVKLLMRVSESCTQFALSILWAIYKLAPEECASKAVEAGLAAKLLLVIQSGCNPVLKQMSSEFLKMCSLNYSTSILISKYWYKGKKPKINQRTKRVKLHTWLAGFAGWGTMSSWLARSLADSLRLDGDENDLVSDPTSPRSHPPQHQPQDNNNNNAVVGSEQEEEEAQGHGRGVKEDLDEIKQTLTRQFWGMASFLAPPPPTSHPSSPPPHSHSSSPPSRSDPNSFPPNQQQYHVQDAAIRDQSGRDCSVAEQERVHANDSGSIGSDSELDREPEMEEYDLERAVGITEEVLSFAMNIGKHPETWLDFPIDEEDDPQDFDMSDAQEEHALVIERLTPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKHDAAILSTPQVMEARAMWMKELHKQIKPEFEYFGRSGAYSRGTAQRDDFAPSLLDDAYSDDITPRTYGSETTSSSMLADNETVKHTVESSETRFIDKSIIEEKPIIKTEIKDLKCSRSSHIIIQDYDDDDVDWPEEDSDLGGMTLPIVNEEDISFSDLEDDDYGIKPVGCNTSSKVV* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0421 883 MobiDBLite consensus disorder prediction 499 513 - -
Aev08g0421 883 SUPERFAMILY ARM repeat 129 405 IPR016024 -
Aev08g0421 883 SUPERFAMILY BSD domain-like 622 708 IPR035925 -
Aev08g0421 883 MobiDBLite consensus disorder prediction 534 560 - -
Aev08g0421 883 PANTHER WDSAM1 PROTEIN 16 416 IPR045185 GO:0061630
Aev08g0421 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 121 IPR013083 -
Aev08g0421 883 MobiDBLite consensus disorder prediction 472 497 - -
Aev08g0421 883 Gene3D - 124 402 IPR011989 -
Aev08g0421 883 ProSiteProfiles U-box domain profile. 38 112 IPR003613 GO:0004842|GO:0016567
Aev08g0421 883 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 16 416 - -
Aev08g0421 883 Pfam U-box domain 39 109 IPR003613 GO:0004842|GO:0016567
Aev08g0421 883 MobiDBLite consensus disorder prediction 578 612 - -
Aev08g0421 883 ProSiteProfiles BSD domain profile. 659 704 IPR005607 -
Aev08g0421 883 SMART Ubox_2 42 105 IPR003613 GO:0004842|GO:0016567
Aev08g0421 883 SMART wurzfinal6 652 704 IPR005607 -
Aev08g0421 883 SUPERFAMILY RING/U-box 32 109 - -
Aev08g0421 883 MobiDBLite consensus disorder prediction 463 513 - -
Aev08g0421 883 CDD RING-Ubox_PUB 43 85 IPR045210 -
Aev08g0421 883 Gene3D BSD domain 620 712 IPR035925 -
Aev08g0421 883 MobiDBLite consensus disorder prediction 529 566 - -
Aev08g0421 883 Pfam BSD domain 653 708 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0421 Aev-Chr8 2320905 2326541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0421 20 415 U-box Gene Family AT3G49810 64.987 5.72e-173 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0421 - - gmx:100808281 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0421 08 2320905 2326541 Aev08g0421 08 2320905 2326541 ECH