Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0399 ATGGAAACACTTGGAGCTGCAGCCTTCCCTGATGGTGGAGAATGGGACTGCATTCGCAGAATGCTTTCTATTGAAGAGCAAGATCAGGACTCACCACCATTTGTTGGGAGCATTGGAGTACAAGAATCAATGTTTTACTCCACTTCTGAATCCGGGAGATATAGTGAGAGTATGTTCTATTCTCTTGATCATGCTGACAACTCTAATTTGCACTATAACTCTCAAGAAAGTAGTGATTGTAGTGGCCATAATGTCTTCATTGCCAATCCGGGTGGTGATGATACAAATTGCTATTTCGGTTATCCTGATAATCTGCTAGCATATAATAGCTATACGTCCAAAGGTTTTTGCATGATGAGTGAGCAAGACTCTTGCTTTTTTGTTCCATCACTCACTGACACTGTAATGGAAGAGGGTGTGATGAGCTTCAGTGAAGATGGGAGAAGTGATGGATCAGAGAATAATTCTGATCACGGCCAAATGGAACCCATTGTTCCTTCCCACCACAAGCAGTTGCAGCTCAAAAGGAAGCCTGAAGAAGATGAAATAAACATAAGTTCATCATTATGTGGGAATCAAAAGAAAAGACCTCGTGCTTCAAGAGATGTGCAAAGATGCATGAAGAATGCAAGGTCCAAGAAGAACCAGAAGCCTGACAGAAGTGAAAATGAGGCACAAGAGACCACTAATGCAGGATCAGATCATGGACATGGCTCTAGCAGTTACACCTCAGATCAGGAAAATAGTAATACTTCAGCATCTCTCAATTCAAATGGGAAGAGAAGAGCCAGTAGAGGATCAGCAACAGATCCTCAGAGCCTTTATGCAAGGAAGAGAAGAGAGAGGATAAATGAGAGACTAAGAATTCTACAGAGTCTTGTCCCCAATGGAACAAAGGTTGATATAAGCACAATGCTGGAAGAGGCACTCCATTACGTTAAATTTTTGCAGCTCCAGATCAAGCTTTTAAGCTCTGATGATTTGTGGATGTACGCTCCCATAGCTTACAATGGAGTTGACATTGGACTTGATCTGAGCAACAAGATTTCTCCACCTTTATGA 1062 0.419 METLGAAAFPDGGEWDCIRRMLSIEEQDQDSPPFVGSIGVQESMFYSTSESGRYSESMFYSLDHADNSNLHYNSQESSDCSGHNVFIANPGGDDTNCYFGYPDNLLAYNSYTSKGFCMMSEQDSCFFVPSLTDTVMEEGVMSFSEDGRSDGSENNSDHGQMEPIVPSHHKQLQLKRKPEEDEINISSSLCGNQKKRPRASRDVQRCMKNARSKKNQKPDRSENEAQETTNAGSDHGHGSSSYTSDQENSNTSASLNSNGKRRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLEEALHYVKFLQLQIKLLSSDDLWMYAPIAYNGVDIGLDLSNKISPPL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0399 353 CDD bHLH_AtIND_like 268 330 - -
Aev08g0399 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 316 IPR011598 GO:0046983
Aev08g0399 353 Gene3D - 268 325 IPR036638 GO:0046983
Aev08g0399 353 SMART finulus 273 322 IPR011598 GO:0046983
Aev08g0399 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 332 IPR036638 GO:0046983
Aev08g0399 353 MobiDBLite consensus disorder prediction 142 279 - -
Aev08g0399 353 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 7 352 - -
Aev08g0399 353 MobiDBLite consensus disorder prediction 195 224 - -
Aev08g0399 353 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 352 - -
Aev08g0399 353 MobiDBLite consensus disorder prediction 225 271 - -
Aev08g0399 353 Pfam Helix-loop-helix DNA-binding domain 277 317 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0399 Aev-Chr8 2207305 2208798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0399 161 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 50.235 4.09e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g0399 HLH 7.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0399 - - gmx:100797500 315.079