Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0384 ATGGGGAGAGTGAAGCTTCCGATGAAGAAGATTGAGAACACAACAAATAGGCAAGTGACTTTCTCAAAGAGGAGGAATGGAATAATCAAGAAAGCTTATGAACTCTCTGTTCTCTGTGATGTTGATGTTGCTCTCATCATGTTTTCCCCATCTGGCAGACCCACTCTCTTCTCTGCCAACACTAGCATTCAAGAGATTCTAGAACGATATATTAATCTTCCCGATCAGGAACGCGGAAAGATCCATAACCAAGAGAACATTCAGAAGATGCTTAATAAGTTGAAAGCTGAGGCCGATCAAATATGCCAACTCCCTAGCCCGATGAATACAGGTTCCCAGATTGAGGAGATTCAGAGAGAAATTTGTGTATGCAAGTCTCAAATGGAAGAGATGGAGAAGCGGCTAAGGCTATTTGAAGGTGACCCATCTGAGATCACTACACTGTGTGAGGCTGAATATCGCGAACATGTCCTTCAGCAAACTCTCAAAAAAGTTCACCTGCAAAAAGTCCATCTTGCAACAACTGTAGATGTAGGTGGATTTGTTGACAGGACATCAAAGAACACAGAAAACTGGCTTCTGCAAGGAGATCCACATGTGCAGATTCTGAACTTTGACGATGCTTATGACCCTGCTCCTCCTCTCGGAGATCAACAATCACATAGTGCTGTTATTGATGATATGTTAGCACCAATTTCTACCCTTAATTTGCCTTCTACAAACACTGGTCAAGATGGCCAAATGAATTCAAGGGACAGTCTAGAGGCATGCAATAATTCGCTAGGTCCTGAGTTTGGACAAGTTAATAGCATCAGTCAGTCCTCTTGGGAACACCTCCATCATTTAGGGTGTGGATCTTTGTCGGCAGCAGAGGCAAGGGAAGGACTACTAATTGAACAGTATTTATCTCAGTTCACCTAA 921 0.4289 MGRVKLPMKKIENTTNRQVTFSKRRNGIIKKAYELSVLCDVDVALIMFSPSGRPTLFSANTSIQEILERYINLPDQERGKIHNQENIQKMLNKLKAEADQICQLPSPMNTGSQIEEIQREICVCKSQMEEMEKRLRLFEGDPSEITTLCEAEYREHVLQQTLKKVHLQKVHLATTVDVGGFVDRTSKNTENWLLQGDPHVQILNFDDAYDPAPPLGDQQSHSAVIDDMLAPISTLNLPSTNTGQDGQMNSRDSLEACNNSLGPEFGQVNSISQSSWEHLHHLGCGSLSAAEAREGLLIEQYLSQFT* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0384 306 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev08g0384 306 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev08g0384 306 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev08g0384 306 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977|GO:0045944
Aev08g0384 306 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev08g0384 306 SUPERFAMILY SRF-like 2 83 IPR036879 GO:0003677|GO:0046983
Aev08g0384 306 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev08g0384 306 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 287 - -
Aev08g0384 306 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL104 ISOFORM X1 1 287 - -
Aev08g0384 306 Gene3D - 13 97 IPR036879 GO:0003677|GO:0046983
Aev08g0384 306 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 56 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0384 Aev-Chr8 2120887 2122820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0384 1 193 Type I MADS-box Gene Family AT1G22130 47.005 7.50e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev08g0384 SRF-TF 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0384 - - mtr:MTR_3g102570 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0384 08 2120887 2122820 Aev08g0384 08 2120887 2122820 ECH