Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0363 ATGGGAAGCATGAAGGTGCATCAGCTGGCACGTGGACTGTGCTGGGATCAGCAGGAAGTGCCCTCCCTCACGCTTGGGTGCAAGCGCTTGCGCCCTCTCGCTCCCAAGCAAATTATTCTCACCACTTCTCCACCCCCACCCCCACCCAATTTCGATCTCAAGACCTTCATCAGACCTGATTCTGGCCCCAGAAACCACCTTCTTCCCCACTCTCCCAAGAAAGATAATAATAACCCACCTCCTTCACCCCAGCAGCAGGTGGAAACGCATCCAGGAGGGACTCGGTGGAATCCGACGCAGGAGCAGATAGGGATACTGGAGATGCTGTACAGAGGGGGGATGAGGACTCCGAATGCGGAGCAGATAGAGCAGATCACAGGGCAGCTCAGCAAGTACGGCAAGATCGAAGGCAAGAACGTCTTCTATTGGTTCCAAAACCACAAAGCCCGCGAGAGGCAGAAGCAGAAGCGCAACACCATGGCCACCGAGGAGGAAGGAGATAGCAGCCCCTACAAGAAGAGGTGCCGCAGATGGCCATTTGAGGGATTGCTGCTGGAACACACCACCATGCCCATGCCCATGCCCATGCCCTCCCATACCTGTACAGATACTCAGCAACAACGTACAACAACTCTCGAGCTTTTCCCGTTGCACCCGGAAGGCAGATAA 669 0.5546 MGSMKVHQLARGLCWDQQEVPSLTLGCKRLRPLAPKQIILTTSPPPPPPNFDLKTFIRPDSGPRNHLLPHSPKKDNNNPPPSPQQQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAEQIEQITGQLSKYGKIEGKNVFYWFQNHKARERQKQKRNTMATEEEGDSSPYKKRCRRWPFEGLLLEHTTMPMPMPMPSHTCTDTQQQRTTTLELFPLHPEGR* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0363 222 CDD homeodomain 94 155 IPR001356 GO:0003677
Aev08g0363 222 PANTHER WUSCHEL-RELATED HOMEOBOX 4 163 222 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Aev08g0363 222 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 163 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Aev08g0363 222 SMART HOX_1 91 158 IPR001356 GO:0003677
Aev08g0363 222 SUPERFAMILY Homeodomain-like 90 158 IPR009057 -
Aev08g0363 222 MobiDBLite consensus disorder prediction 39 53 - -
Aev08g0363 222 Pfam Homeodomain 94 153 IPR001356 GO:0003677
Aev08g0363 222 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
Aev08g0363 222 MobiDBLite consensus disorder prediction 80 98 - -
Aev08g0363 222 MobiDBLite consensus disorder prediction 151 173 - -
Aev08g0363 222 Gene3D - 77 179 - -
Aev08g0363 222 MobiDBLite consensus disorder prediction 39 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0363 Aev-Chr8 1960480 1961373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0363 4 162 Wox Gene Family AT1G46480 61.310 1.09e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aev08g0363 Homeodomain 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0363 - - gmx:100781015 262.307