Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0357 ATGGACAACATTGACCAACTGAAATCATCCTCACCGTCGGATGAGGATCAGATGGACATGATGATGGCGATGATGATGATGCAGCTCCCTGAATTCTCTGCATCGTACAGTGACAGCACCACCGCCGAGGCATTTCCACCGCAGCCGGAGTTTCACAGCACCGCCATCACTATGCGGCTGTCCGATTCAATTGACAACCCTCCCACTATGCAATGGTCTTCATTCACCGATCATCAATTACCATCAAATAGTTCCACCGCAATCTCTTTCTCCAACAACAGCAGCAGCACTGCCCAATTATTGCTTCAGCGACAAGGCCAAGCAACTTGTTCAGCTTCTCTGTCGGCAAATAGATTGGGCAAAACCAGCACCGAGGAGGGTGCGAATCCTTGCGGCGGCAGGAGGGAGAACTCAGAGAGCAATAATAGTAAGAATAAGCGGAATAAGTCGATGGCGGCGATGAGGGAGATGATATTCAGGATAGCGGCAATGCAGCCAATAAACATAGACCCTGAATCAGTGAAGGCGCCGAAGCGCAGGAACGTGAAGATCTCGAAGGACCCTCAGAGCGTGGCGGCGCGGCATCGCAGAGAAAGGATAAGCGAGAGGATTAGGATTCTGCAGAGACTGGTGCCTGGGGGGACCAAGATGGACACTGCCTCCATGTTGGATGAGGCTATTCACTACGTCAAGTTTCTCAAGACTCACCTTCACTCACTTCAGCAACGTGCTGCTGCAAACACCAACCATAATAACAATCATTCTGTTGTTGTTGCTGCTGCAGACATAGGGATAGGCTTCCCTGTTCCCATCTCTATGCCTACTAGGACTAGCGCCGCCTCTAATTATCATCTTTCTATGCCTAAACTTTATCAAGCTCCAAACCTTGAGCAGTAA 897 0.4994 MDNIDQLKSSSPSDEDQMDMMMAMMMMQLPEFSASYSDSTTAEAFPPQPEFHSTAITMRLSDSIDNPPTMQWSSFTDHQLPSNSSTAISFSNNSSSTAQLLLQRQGQATCSASLSANRLGKTSTEEGANPCGGRRENSESNNSKNKRNKSMAAMREMIFRIAAMQPINIDPESVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTHLHSLQQRAAANTNHNNNHSVVVAAADIGIGFPVPISMPTRTSAASNYHLSMPKLYQAPNLEQ* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0357 298 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 3 259 IPR045843 GO:0003700|GO:0006355
Aev08g0357 298 Pfam Helix-loop-helix DNA-binding domain 193 233 IPR011598 GO:0046983
Aev08g0357 298 MobiDBLite consensus disorder prediction 62 91 - -
Aev08g0357 298 MobiDBLite consensus disorder prediction 117 148 - -
Aev08g0357 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Aev08g0357 298 Gene3D - 180 257 IPR036638 GO:0046983
Aev08g0357 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 244 IPR036638 GO:0046983
Aev08g0357 298 PANTHER BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN 3 259 - -
Aev08g0357 298 SMART finulus 190 239 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0357 Aev-Chr8 1911049 1911945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0357 148 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 84.000 6.02e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev08g0357 HLH 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0357 - - vra:106761667 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0357 08 1911049 1911945 Aev08g0357 08 1911049 1911945 ECH