Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0347 ATGGCCGTAGCAGTTGGAAGAAGCTTCCCATCTCAGCCATGTTCTTTATTCAACAGTGGTAAGACCATTGATAATAAACCTTTACCAGGCGGAAGATGCTTGTGGTTGGGGTCTGCTTCTTCTGCTGGAGCAGGAGTCACTACTAGTCGGCGAGGAGTTTGTGTCGCGGCGCAACAGCGACCTACATGGCTCCCAGGACTTGATCCCCCACCTTATCTTGATGGAACTCTGGCCGGAGATTATGGGTTTGACCCTCTTGGACTTGCAGAAGATCCGGAGAGCTTAAGGTGGTATGTGCAAGCAGAGCTTGTCCATTCTCGCTTTGCAATGCTTGGGGTCTTGGGAATTCTAGTCACTGATCTACTTCGCGTCACCGGAGTTAGTAAAATTCCGGTTTGGTTTGAAGCTGGTGCAGCAAAATACGACATTGCCAACACACAGACACTTATCGTTGTTCAACTACTTTTGATGGGGTTTGCTGAAACAAAAAGGTACATGGATTACGTTAGTCCTGGTTCTCAAGCTAAAGAAGGGTCCTTTTTTGGATTGGAAGCTTCACTAGAAGGCTTAGAGCCAGGGTATCCTGGGGGTCCTCTGTTGAATCCTCTTGGTCTGGCTAAAGACATAAAAAACGCTCATGATTGGAAGCTTAAAGAGATCAAGAACGGGCGACTTGCAATGGTGGCGATGCTTGGGATCTTTGTGCAAGCTTCAGTGACTCATGTTGGACCAATTGATAACCTAGTGGAGCATCTCTCCAATCCATGGCACAAAACTATTATTCAGACCCTTGCAAATTCTAGTTCTTAG 810 0.4691 MAVAVGRSFPSQPCSLFNSGKTIDNKPLPGGRCLWLGSASSAGAGVTTSRRGVCVAAQQRPTWLPGLDPPPYLDGTLAGDYGFDPLGLAEDPESLRWYVQAELVHSRFAMLGVLGILVTDLLRVTGVSKIPVWFEAGAAKYDIANTQTLIVVQLLLMGFAETKRYMDYVSPGSQAKEGSFFGLEASLEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQASVTHVGPIDNLVEHLSNPWHKTIIQTLANSSS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0347 269 SUPERFAMILY Chlorophyll a-b binding protein 55 266 - -
Aev08g0347 269 Gene3D Chlorophyll a/b binding protein domain 62 269 - -
Aev08g0347 269 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 40 265 - -
Aev08g0347 269 Pfam Chlorophyll A-B binding protein 69 237 IPR022796 -
Aev08g0347 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 40 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0347 Aev-Chr8 1868299 1869629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0347 49 264 Chloroplast and Mitochondria Gene Families AT3G61470 46.083 6.04e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0347 K08911 - gmx:100804934 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0347 08 1868299 1869629 Aev08g0347 08 1868299 1869629 ECH