Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0339 ATGAAAGGAAAGACGGCTGAGGAGTACGAGGAGAGACGCCGGCAAAGATTGGAGGAGAACAAGAAGAGGATGGAAGCTCTCAATCTCCCTCTCCTTTCTCAAGCCCTCATTAACTCTCCCAATTCCAAAACCAAGTCCTCTCCCTCTCCGCTGAAGCGCGTCAAATCCCGCACCATCGAGAAGCAGGTTGTTGTCGTCAGGAGGTCCAGCCGCGTCGCCAACCTGCCCTCTCCCGTCTACAAAGAGGTGGTTATTGATCGCATAACAATACCTAGAAGATCTTATAATAGGCATAGGGATTTTTCGAACCGGGTATATGCTTCTGAGGAAGCAAGAGAGGAAGCACTTGAGAAGGCCTACAAGATACAGTCCGATTTAGAGTCTGAATCTGAGCATCCAATCTTTGTTAAGTCTATGCTCCAGTCACACGTCACCGGGGGATTCTGGCTGGGCCTTCCAGTGCACTTCTGCAAGAGAAACCTTCCAACGAAGGATGAAGAGATTACTTTGATTGATGAGGCTGGTGATGAGTATCCAACAGTATATTTGCATGGGAAAACAGGACTTAGTGGTGGATGGAGAGGTTTTTCGATTGCTCACAACCTAGCTGATGGAGATGCTTTGGTTTTTCAATTGATCAAGCGCACTGAATTCAAGGTGTACATTGTTAGAGCGAACAGTGATGCAGAGGATAATAAAACAGCTTAA 708 0.4703 MKGKTAEEYEERRRQRLEENKKRMEALNLPLLSQALINSPNSKTKSSPSPLKRVKSRTIEKQVVVVRRSSRVANLPSPVYKEVVIDRITIPRRSYNRHRDFSNRVYASEEAREEALEKAYKIQSDLESESEHPIFVKSMLQSHVTGGFWLGLPVHFCKRNLPTKDEEITLIDEAGDEYPTVYLHGKTGLSGGWRGFSIAHNLADGDALVFQLIKRTEFKVYIVRANSDAEDNKTA* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0339 235 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 7 228 IPR044837 -
Aev08g0339 235 Coils Coil 7 27 - -
Aev08g0339 235 Gene3D - 107 228 IPR015300 -
Aev08g0339 235 ProSiteProfiles B3 DNA-binding domain profile. 135 226 IPR003340 GO:0003677
Aev08g0339 235 MobiDBLite consensus disorder prediction 36 53 - -
Aev08g0339 235 CDD B3_DNA 133 224 IPR003340 GO:0003677
Aev08g0339 235 PANTHER B3 DOMAIN-CONTAINING PROTEIN 7 228 - -
Aev08g0339 235 SMART B3_2 135 226 IPR003340 GO:0003677
Aev08g0339 235 MobiDBLite consensus disorder prediction 36 55 - -
Aev08g0339 235 MobiDBLite consensus disorder prediction 1 23 - -
Aev08g0339 235 SUPERFAMILY DNA-binding pseudobarrel domain 128 226 IPR015300 -
Aev08g0339 235 Pfam B3 DNA binding domain 135 225 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0339 Aev-Chr8 1828471 1830661 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0339 9 232 B3 DNA Binding Superfamily AT3G19184 52.679 6.67e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev08g0339 B3 8.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0339 - - gmx:100797091 317.005