Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0328 ATGAATAATAGAAGCTCATCGTCAATCACGGCGTCTTCCTCTGATGACTCTTCTTCGTCAGAGCAGTCGACTCAGAACAGGGCAGAGAGGATCAAAGGCCCATGGAGCGCGGAAGAAGACCGCATCCTGACCCGACTCGTGGAGCGATACGGGCCACGGAACTGGTCCCTCATCAGCCGCTACATAAAGGGGAGGTCAGGGAAGTCGTGCAGGCTGCGCTGGTGCAACCAGCTGAGCCCCACGGTGGAGCACCGCCCATTCTCCGCCCAAGAGGACGACACCATTATCGCCGCCCATGCCCAGTACGGAAACAGGTGGGCCACCATTGCACGATTACTGCCGGGCCGAACCGATAATGCCGTCAAGAATCACTGGAACTCCACTCTGAAGCGCAGGGCCAGGGACCAGCGCGCCTCTTCTCTTGTTGATGCGCCCACCAGCCAGAGGCCCTCTTCCTCCTCTGGGCCTGCCGTGGAGGATGACCCGTTGACAGCCTTGACTCTCGCTCCGCCTGGGATTGGCGGCGGTGGTAGCAGTGGCGCGGATCACGGAGCAGCCTCGGCGGAGAGTGTGCCGTCGGGGTTTTGGGATGTGATGAGGGATGTGATTGCCAGGGAAGTGAGGGAATATGTATCTTCCAATTTCTCTCATCATCATTCCGGCTTGCATTGA 672 0.5908 MNNRSSSSITASSSDDSSSSEQSTQNRAERIKGPWSAEEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSAQEDDTIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRARDQRASSLVDAPTSQRPSSSSGPAVEDDPLTALTLAPPGIGGGGSSGADHGAASAESVPSGFWDVMRDVIAREVREYVSSNFSHHHSGLH* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0328 223 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 3 208 - -
Aev08g0328 223 MobiDBLite consensus disorder prediction 1 30 - -
Aev08g0328 223 Gene3D - 31 83 - -
Aev08g0328 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 82 IPR017930 -
Aev08g0328 223 SMART sant 83 131 IPR001005 -
Aev08g0328 223 SMART sant 31 80 IPR001005 -
Aev08g0328 223 SUPERFAMILY Homeodomain-like 30 125 IPR009057 -
Aev08g0328 223 MobiDBLite consensus disorder prediction 1 33 - -
Aev08g0328 223 Pfam Myb-like DNA-binding domain 35 92 - -
Aev08g0328 223 ProSiteProfiles Myb-like domain profile. 27 78 IPR001005 -
Aev08g0328 223 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Aev08g0328 223 CDD SANT 34 76 IPR001005 -
Aev08g0328 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 133 IPR017930 -
Aev08g0328 223 MobiDBLite consensus disorder prediction 130 190 - -
Aev08g0328 223 Gene3D - 85 154 - -
Aev08g0328 223 CDD SANT 86 129 IPR001005 -
Aev08g0328 223 PANTHER MYB PROTEIN-RELATED 3 208 - -
Aev08g0328 223 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0328 Aev-Chr8 1771983 1772654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0328 28 182 MYB Transcription Factor Family AT5G67300 61.783 2.53e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev08g0328 Myb_DNA-bind_6 1.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0328 - - gmx:778051 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0328 08 1771983 1772654 Aev08g0328 08 1771983 1772654 ECH