Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0303 ATGGACTGGTTTAGCAAACTTTTTAAATGCTCCAAACATAAGCGTAGTGCAGATTATGAAGTGGATACAGATTCTACTGTGCCATCATCAACTTCAGGGGATGAGTCGTCAAAGAGTGAGAATGAGAGTGGAGACATTGAACCTGCTATTACACTACCTCTGGCAGAAGGAAATGAAAATGCAAATGACAGCAATTCACAGCAAGAACATGAACACCTTCCCAGAGCTAAAGAAGAAAGTTATGGAAATGGAAATACGTATGAACCATATCTGTATCAAATGTATTTCCCAACGGATTCAAGGATTTGTGCCGGCTGTAATACTGATATCGGTGACGCGCAATATCTTCGTTGCTTGAATGCATTCTGGCATCCTCTATGCTTCCGGTGCCGCGGTTGCAACCAGCCAATATCTGATGAGCCGCAAGGGACACCATATACTGATCTAAGTGATGGAAGGAAGATATGCTTAGAGTGTATGGAGTCTGCTATCATGAATAGTGATCAATGCCAACCCCTTTACCATGACATTAAGGAATTCTTTGGAATTCAAAATATGGAACTAGACCAGGAAATACCAATATACATGGTTGAAAGGCATGCGCTGAATCAAGGAGGAGAGTGTGAAAGGGAATTGAATGGCCATCCATGCGTGATTGAAATCAGAGGAATTTGCCTCTCAGAGTCAGAGGTAAAGGGTACAAGCAATGGAAGAGGAAAAGGAAAAGGAAAAGAAAAAACGAAACGGCACTGTAATGTGACAGCAATACACCTTCTGTTTGGTCTGCCAAGGCTTCTTACTGGATCGATCCTAGCTCATGAGATGATGCATGCATGGCTGCGAATTGAAGGTTATGAGGCCATGGATCAATATGTTGAAGAAGGTATTTGTCAGGCTGTGGCTTATTTGTGGTTGGAGGCTGAGCTTTCTTCTGGATCAAGCAACAACTTTGCACCGGCATCGTCCTTGTTCGCATACGATGCACCTAGGACTTTTGGGGAATTCTGCAAGTACCTGATTGAATCAAACATGTCACCTGTTTATGGAGGAGGATTTAGGGCAGCTATGCTAGCAGTGCTCAATTATGGTCTACAAATGACCCTTCACCATATCAAGACAACAGGGAGTCTCCCACATGTTAGGAATTAA 1149 0.4299 MDWFSKLFKCSKHKRSADYEVDTDSTVPSSTSGDESSKSENESGDIEPAITLPLAEGNENANDSNSQQEHEHLPRAKEESYGNGNTYEPYLYQMYFPTDSRICAGCNTDIGDAQYLRCLNAFWHPLCFRCRGCNQPISDEPQGTPYTDLSDGRKICLECMESAIMNSDQCQPLYHDIKEFFGIQNMELDQEIPIYMVERHALNQGGECERELNGHPCVIEIRGICLSESEVKGTSNGRGKGKGKEKTKRHCNVTAIHLLFGLPRLLTGSILAHEMMHAWLRIEGYEAMDQYVEEGICQAVAYLWLEAELSSGSSNNFAPASSLFAYDAPRTFGEFCKYLIESNMSPVYGGGFRAAMLAVLNYGLQMTLHHIKTTGSLPHVRN* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0303 382 CDD LIM_DA1 103 139 - -
Aev08g0303 382 MobiDBLite consensus disorder prediction 22 37 - -
Aev08g0303 382 PANTHER PROTEIN DA1-RELATED 2 140 378 IPR045218 -
Aev08g0303 382 MobiDBLite consensus disorder prediction 13 81 - -
Aev08g0303 382 Pfam LIM domain 103 159 IPR001781 -
Aev08g0303 382 Gene3D Cysteine Rich Protein 86 165 - -
Aev08g0303 382 PANTHER PROTEIN DA1-LIKE 140 378 - -
Aev08g0303 382 SMART lim_4 102 159 IPR001781 -
Aev08g0303 382 ProSiteProfiles LIM domain profile. 101 166 IPR001781 -
Aev08g0303 382 Pfam Protein DA1 185 373 IPR022087 -
Aev08g0303 382 PANTHER PROTEIN DA1-RELATED 2 1 139 IPR045218 -
Aev08g0303 382 ProSitePatterns LIM zinc-binding domain signature. 103 137 IPR001781 -
Aev08g0303 382 PANTHER PROTEIN DA1-LIKE 1 139 - -
Aev08g0303 382 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 95 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0303 Aev-Chr8 1645880 1648435 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev08g0303 DA1-like 5.5e-55 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0303 - - gmx:100809736 296.204