Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0290 ATGACGGAGCCTCCGCATCATAATCCTTCTTCGCCAATGGCACTTTCCGACTTACCTCAACCTTCCCCCTCCAAAAGGAAGCGAAACCTTCCCGGAATGCCAGATCCGGATGCTGAGGTGGTTGCTTTATCGCCGAAGACACTGTTAGCGACGAACCGTTTCGTGTGCGAGATCTGCAACAAAGGGTTCCAACGCGACCAGAACCTGCAGCTTCACCGGCGAGGCCACAACCTTCCATGGAAGCTCCGGCAGCGAGACACCACGGAGGTTCGGAAGAAGGTGTACGTGTGCCCCGAAACTACCTGCGTGCACCACAACCCAGCCAGGGCGCTTGGGGACCTTACAGGGATCAAGAAGCACTTTTGCAGAAAGCACGGCGAGAAGAAGCTCAAATGCGAGCGTTGCTCCAAGAAATACGCCGTAAAATCCGATTGGAAGGCTCACATGAAGACTTGCGGAACCAGAGAGTACCGATGCGCTTGCGGCACCTTGTTCTCTAGGAGGGATAGCTTTGTCACGCACAGAGCTTTTTGCGATGCCTTAGCTGAAGAGAGTGCCAGAACCCAAACCCAAACCCTAGGCACTGGCAAGGATGACGTGGAGGCTCCTTCTTCTTCCTCTTCGCCGCCTCCACCGCCGCTTACTCCGTCGACGTCGGTAGTATCTCCGACTCTCTCCATTCAGAGCTCAGAAATAATTGCGGAAAATGCAGCAGCGAGGCAGTCGCCGCCACCTTCGAACCCAACAACGTTGCTAGTGAACGCTGCAACAACCGTTACACCATCAATGAGTGGCAATTTCTTTGCAAGCGTGTTGGCATCAGCGGCAGCACCTAATTCAACATTCCCTAACCTCACCGCCGCTATAGCAGCCATTGAACCCACATCCCTCACCCTCTCTTCCCCTCTCTATCTCTCCAGCAACGACCCTCCCTTACAAGACCCTCACCATCACCACAACCACCACAACTACACCGCTGCATTGTCCGCCACGGCATTGCTCCTGAAAGCGGCTGAAATGGGTGCCGCTGCATCCAATGCATCATCGTTGCTCCGAGGCTTTGGCTTGTCGTCGTCATCATCATCATCATCCCCCACGGGTCAAGATGACCCAACGACACAATGGAGCAGACATGTGAAGCAAGAGCAGAATCTGATGAGTACTACTCCGGCAGATCATAACCTCGGGCTTGGACTTCCATGTGGGAATAATCATCATAATGCTGCGGGTTTTGCAGATGTCATGATGGGGTCCCCTCCTGGGCCCGGCCCATTTGGTGGTAGTAATCATCAGCCCATGATGACCCGTGATCTTCTTGGTCTTGGCATCGGTGGCGGTGGTGCTGGCGGTGCTAGCAGAGGTGGTCTTTCTTCTCTGCTAACATCTTTTGGAGGAGGGAGCTTCGATTCATCAGGAGGTGGTGGTGGTGTTTAG 1434 0.5425 MTEPPHHNPSSPMALSDLPQPSPSKRKRNLPGMPDPDAEVVALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRDTTEVRKKVYVCPETTCVHHNPARALGDLTGIKKHFCRKHGEKKLKCERCSKKYAVKSDWKAHMKTCGTREYRCACGTLFSRRDSFVTHRAFCDALAEESARTQTQTLGTGKDDVEAPSSSSSPPPPPLTPSTSVVSPTLSIQSSEIIAENAAARQSPPPSNPTTLLVNAATTVTPSMSGNFFASVLASAAAPNSTFPNLTAAIAAIEPTSLTLSSPLYLSSNDPPLQDPHHHHNHHNYTAALSATALLLKAAEMGAAASNASSLLRGFGLSSSSSSSSPTGQDDPTTQWSRHVKQEQNLMSTTPADHNLGLGLPCGNNHHNAAGFADVMMGSPPGPGPFGGSNHQPMMTRDLLGLGIGGGGAGGASRGGLSSLLTSFGGGSFDSSGGGGGV* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0290 477 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Aev08g0290 477 Pfam Zinc-finger of C2H2 type 54 76 - -
Aev08g0290 477 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 6 471 - -
Aev08g0290 477 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 76 IPR013087 -
Aev08g0290 477 MobiDBLite consensus disorder prediction 1 18 - -
Aev08g0290 477 MobiDBLite consensus disorder prediction 188 222 - -
Aev08g0290 477 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 6 471 - -
Aev08g0290 477 MobiDBLite consensus disorder prediction 1 36 - -
Aev08g0290 477 MobiDBLite consensus disorder prediction 355 376 - -
Aev08g0290 477 Gene3D Classic Zinc Finger 108 188 - -
Aev08g0290 477 SUPERFAMILY beta-beta-alpha zinc fingers 53 151 IPR036236 -
Aev08g0290 477 MobiDBLite consensus disorder prediction 188 204 - -
Aev08g0290 477 Gene3D Classic Zinc Finger 34 104 - -
Aev08g0290 477 MobiDBLite consensus disorder prediction 412 431 - -
Aev08g0290 477 SMART c2h2final6 95 125 IPR013087 -
Aev08g0290 477 SMART c2h2final6 130 150 IPR013087 -
Aev08g0290 477 SMART c2h2final6 54 76 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0290 Aev-Chr8 1586589 1589268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0290 17 468 IDZ Gene Family AT5G66730 49.497 3.59e-129 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev08g0290 zf-met 0.0034 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0290 K25869 - gmx:100818095 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0290 08 1586589 1589268 Aev08g0290 08 1586589 1589268 ECH
Aev05g0535 05 3696911 3699413 Aev08g0290 08 1586589 1589268 ECH