Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0247 ATGTATCCCAACCAAGCCTTTTCTTCAGGATCCTATTCTGATATGTTCTCTGGGAGTCCTTTATTGCCTCACAACTACAATGGATCTGTTGGAGGACCAACTATGGGTCATCCACCTTGCAATTCTTTTGCTGCTGGAGATTCCCATCTTGTTTCAAGGACTCAAATGGGGATAGTAGATACTGACCAAAATGCACAGTGCCAAGGCTTATCTCTCAGTCTAGGGACACTGATGCCTCCTACTGCATCTGTCCTTCCATTTCAATACCAGTATAATCCTGGCACTGGTTTCTCATCACTGATGAATGAGGCTAACCTCCATAAGGAGTTGAGAAGTGCTGAATGCATGGCATCCTCCGTGTCTTCTGGGGGCTTTCATGACAGTGCTAAAAGGGAGGGTTTGTACAATCCAAACCCCTCAGTTTGCATCAAGGATGTGCACTCTGATCCATGCCTGCAGGGATCACAAGGTTTCTCAAACACTGTCCTGAACTCACAGTATCTTAAGGCCGCACAGGAATTACTTGATGAAATAGCTAATGTCCGAAAGGCTTTGAAGCAAACTGGAATGGAAAACAAAGAGAAGTTCCGTGACATTGGATTAGATGGCTCCAAAGATTCTGATGGGAAATCTACCAGTCAATCTATGCAAGTTTCTTCAGGCCCCAATGGTTCCAATGCCAACCCTCCTGAACTATCTCCTGGAGAACGGCAGAGTTTGTTGGAAAAGAAGACAAAGCTTTTGGTCATGTTGGATGAGGTGGATAAAAGATACAGACAGTATTACCATCAGATGCAGATTGTGGTTTCATCTTTTGATATGGTTGCCGGATGTGGAGCAGCAGAACCATATACAATACTTGCTCTGCGCACTATTTCTCGCCACTTCCGGTGTTTGCGTGATGCTATCAGTGGCCAAATTCAAGTGTGTCAAAGGAGTCTTGGGGAGCAAGAAGGAATACCTCGTCTCCGTAATGTTGATCAGCAACTTAGACAGCAAAAGGCACTTCAGCACCTTGGTGTCATGCGCCAAGCTTGGAGGCCTCAGAGGGGTCTTCCTGAAAACTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAGCATTTTCTGCATCCTTACCCCAAGGATTCAGAGAAAATTATGCTTGCAAGACAAACAGGGTTGACCAGAAACCAGGTGGCTAATTGGTTCATCAATGCAAGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAGGAAGAGTTTGGTGATTCAGAGATAACTGAGAATATGCTCAAAGGTAAAAGAGATGATGCTGAAGCCTCTGATAACAAAGGGGAAGAGTCACAGGATAATTTGATAACCGTTGATATTAGTAGTGTCCAACAAGTTGGGCAACTTCATGGGTTGTTGAAGCCAGAACATGCATCTTCGTCCACTGCAGAGTTGGATAGAGGGATCCAAGGAGAAAATTGTTGGATGGATTCTGGAGCCAGGAAAATGCAGGGAAACCAAAGATTTACTGCCATGAACAACAATGATCATCATCATAATAATAATAATAGTCTTTATTCTTGTGCACCTATCCCAACAAATCAGAATGGTGATGGCAGCAGCAGCATAATTGATTCTACTAATACTCCTGCTGCAGCATATGATCTATCAGAGTTGGGTAACTTTACAGTGGGTGGCCACGTCTCTCTTGCATTGGAGTTGAGGAACTGTGAAAGTGATGGATTTGCTATCTCCGATGATGCCATCCATAAAAGACGTAGTAATAATCAGGCCTTGGCCTCTTCTTCCCCAGAGGCTGATTTGATAGATTATCATTTCACAGATTCTGGAAAGCAACAACACAGGTTCAGCAGCCCTCATCTGTTGCATGAGTTTGTCGTCTGA 1881 0.4423 MYPNQAFSSGSYSDMFSGSPLLPHNYNGSVGGPTMGHPPCNSFAAGDSHLVSRTQMGIVDTDQNAQCQGLSLSLGTLMPPTASVLPFQYQYNPGTGFSSLMNEANLHKELRSAECMASSVSSGGFHDSAKREGLYNPNPSVCIKDVHSDPCLQGSQGFSNTVLNSQYLKAAQELLDEIANVRKALKQTGMENKEKFRDIGLDGSKDSDGKSTSQSMQVSSGPNGSNANPPELSPGERQSLLEKKTKLLVMLDEVDKRYRQYYHQMQIVVSSFDMVAGCGAAEPYTILALRTISRHFRCLRDAISGQIQVCQRSLGEQEGIPRLRNVDQQLRQQKALQHLGVMRQAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEITENMLKGKRDDAEASDNKGEESQDNLITVDISSVQQVGQLHGLLKPEHASSSTAELDRGIQGENCWMDSGARKMQGNQRFTAMNNNDHHHNNNNSLYSCAPIPTNQNGDGSSSIIDSTNTPAAAYDLSELGNFTVGGHVSLALELRNCESDGFAISDDAIHKRRSNNQALASSSPEADLIDYHFTDSGKQQHRFSSPHLLHEFVV* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0247 626 Pfam Associated with HOX 162 304 IPR006563 -
Aev08g0247 626 SUPERFAMILY Homeodomain-like 347 413 IPR009057 -
Aev08g0247 626 SMART prehox3 156 305 IPR006563 -
Aev08g0247 626 CDD homeodomain 346 407 IPR001356 GO:0003677
Aev08g0247 626 MobiDBLite consensus disorder prediction 195 236 - -
Aev08g0247 626 Gene3D - 343 420 - -
Aev08g0247 626 SMART HOX_1 346 410 IPR001356 GO:0003677
Aev08g0247 626 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 56 585 - -
Aev08g0247 626 Coils Coil 164 191 - -
Aev08g0247 626 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 56 585 - -
Aev08g0247 626 Pfam Homeobox KN domain 363 402 IPR008422 GO:0003677|GO:0006355
Aev08g0247 626 MobiDBLite consensus disorder prediction 206 233 - -
Aev08g0247 626 ProSiteProfiles 'Homeobox' domain profile. 343 406 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0247 Aev-Chr8 1397219 1400191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0247 157 419 Homeobox Transcription Factor Family AT2G16400 63.971 6.30e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aev08g0247 POX 6.9e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0247 - - gmx:100791641 802.742