Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0227 ATGAAGATCCAGTGCGACGTGTGCAGCGAAAACCAGGCGTCTCTGTTCTGCACCGCCGACGAAGCCGCCCTGTGCGAGGCGTGCGACCACCGCGTCCACCATGCGAACAAGCTGGCCTCGAAGCACCTCCGCCTGTGTCTCCAGCACCCTCGCGCGGAGCAATTCCCAGTGTGCGACGTGTGCCAGGAGAAGAGGGCTTTTGTGTTCTGTCAGCAAGACAGAGCAATTCTGTGCAAAGACTGTGACTTCCCCATTCACTCTGCCAACGACCACACAAAGAACCACACCAGGTTTCTTCTGACTGGCGTCAAGCTCGCTGCTTCTTCTTCTGCTTCCACGCCTCATCCTCCATCATCACTACCTCCCTCCAACCCCAATCCCAAGAGCACTAGAACTAATTCTTCTTGTAAGGCTCCTCCACAACCACCTCTGCCTCTGCCCAAGAATAATAATGTTGCTCCAAAGCAGGTGCCAGAGCCTCATGGCCATGGAGGCAGCCTGGTGGTAGCAAATGAACAGCAGGGTGCAGGCTTCACGAGCAGCAGCATATCTGAGTATCTGACCAAGACCATCCCGGGCTGGCAGGTCGATGATTTCCTCGATTCCCCTTCTCTTCCCTTCGGATTCTCTAAGGATGGCGGTGATGATTATATGTTGCCAATGTTGGATGCTGCTGCTGGTGTTGGGGGAAATATGATGGGTTCCTTCTTCACCGGTGGGATCTGGGTTCCTCAGGCACCGTCGTCTGTGTATTCGGCGCAGAGTGGTCAACAAAGGGAGCCTAGGGAAGTCAACAACATCAAGGGCAGCAGCAGATCGAGGCTGCTGGGACTGGGTGATGACAACTTCATTGTTCCACAGATGACCCCTGCCACTGCCACCAACACCTCTGCCTCCAAGAGACCTAGACTCTTGTGGTAG 921 0.5505 MKIQCDVCSENQASLFCTADEAALCEACDHRVHHANKLASKHLRLCLQHPRAEQFPVCDVCQEKRAFVFCQQDRAILCKDCDFPIHSANDHTKNHTRFLLTGVKLAASSSASTPHPPSSLPPSNPNPKSTRTNSSCKAPPQPPLPLPKNNNVAPKQVPEPHGHGGSLVVANEQQGAGFTSSSISEYLTKTIPGWQVDDFLDSPSLPFGFSKDGGDDYMLPMLDAAAGVGGNMMGSFFTGGIWVPQAPSSVYSAQSGQQREPREVNNIKGSSRSRLLGLGDDNFIVPQMTPATATNTSASKRPRLLW* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0227 306 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aev08g0227 306 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 302 - -
Aev08g0227 306 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 302 - -
Aev08g0227 306 CDD Bbox1_BBX-like 5 44 - -
Aev08g0227 306 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Aev08g0227 306 CDD Bbox1_BBX-like 57 100 - -
Aev08g0227 306 Pfam B-box zinc finger 56 95 IPR000315 GO:0008270
Aev08g0227 306 Gene3D Classic Zinc Finger 1 100 - -
Aev08g0227 306 SMART bboxneu5 4 47 IPR000315 GO:0008270
Aev08g0227 306 SMART bboxneu5 53 100 IPR000315 GO:0008270
Aev08g0227 306 MobiDBLite consensus disorder prediction 109 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0227 Aev-Chr8 1279335 1280361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0227 1 306 C2C2-CO-like Transcription Factor Family AT1G75540 42.398 7.62e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev08g0227 zf-B_box 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0227 - - gmx:100785978 283.108