Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0215 ATGTCTGCCACGGAAGCGGAGAAGAAGAAGGAGGACGAGGAGGTCAAAGGGGGAGAGCTCCTCTTCTGCGGTGCCACCTGTTGGGATATCATTGGTCGTCGCAAAGGCTCCGTCGACGGTAACCTCGTCTCTCCCTCTCGCCTCCGTCCCCTCGCCGGTATTGATATTCGCTTCATCGCCTCTGGTTGCGCATCTTGTCATTGCGTGGCTCTGGATGTTGAAGGACGTTGCTATACATGGGGCCGTAATGAGAAGGGGCAGCTAGGCCATGGAGACACCATTCAGCGTGATAGGCCGACTGTAGTGTCTGAACTTTCCAAGTTCAAAATTGTCAAAGCTGGGGCAGGGAGGAACCATACGGTGGTTGTGACAGAGGATGGGAATTCACTAGCCTTCGGATGGAACAAGCACGGACAGCTTGGTTCAGGTTCTGCAAGAAATGAAATTGAGTCTTCCCCTGTTCGCTGTCTTGTGTCCGAAGTAACATATACTACGTGTGGTGGTGACTTCACTGTGTGGTTATCATCAATCGAAGCAGCTTCTATACTGACTGCAGGGCTTCCACAGTATGGACAGCTTGGGCATGGAACAGATAATGAGTATAATTCCAAGGACAGCTCTGTTAAGCTGGTGTATGAACCCCAGCCACGCCCTCGAGCAATTGCTGCTCTTGCTGGGGAAACAATTGTCAAAGTTGCATGCGGAACAAATCACACAGTGGCGGTGGATAAGAATGGCTTCGTCTACACATGGGGTTTTGGTGGTTATGGAAGGCTGGGACATAGGGAGCAGAAGGATGAGTGGATCCCTCGACGTATTGATGTCTTCCAGAATAGAAATGTTTTGCCTCCCGATGCAATTATTTCAGCTGGTTCTGTGAATTCTTCCTGCACTGCAGGTGGAGGGCAGTTGTATATGTGGGGCAAAATAAAGAACACTGGTGATGACTGGATGTATCCTAAACCCCTAATGGATTTAAGTGGTTGGAATATACGTTGCATGGATTCAGGAAATATGCACCATTTTGTCGGGGCTGATTCATCATGTATAAGTTGGGGCCATGCTCAGTATGGAGAGTTGGGATATGGGCCTGCTGGACAGAAGTCGTCAGCTGTCCCCAAAAAGGTGGATATACTTGAGGGCATGCATGTTATGAGTGTTGCTTGTGGTATGGGTCATTCCATGGTTATTGTTGATAGAACAAATGCTGCTGATCGACTTGACCAGCTTGATATATATGATGGCAAAGCTTTTGGTGAAGTAAATGAGCCCGTAGCCAAAACTCCAGTGACTAAGCAGACTGCAAAAAAGGGTGCAAAGGGGGCTGAAAATTCAAAGAAGAGGAAAAAGTCTAAAGATTCATCTGAGTCAGAAGAGGAAGCTGATGCTGAAGAAAGTGATGACAGTGAGGATGAAGCTAATGGTGAGGCTGAGGTTAAAAAGTCACGTGGAGGTAAAGGCCGCGGTAAGGCATCTAAAAAGTCAGGTGCTGATGGAAAAGGTCCTAGCCGAGGGCGTGGTCGCCCTCCGGCAGCAAAAAAGAGCAGTCCTACTCCTAAAACTCCTCAAGCAAAATCCGGGTCACTTGATTTTACATTTCTATTCTCCAAGGCGAATCAATTGCTGGGCTCTGCTTTCATAATAAAGAACGCAGACATGCATGCCTCTGACCAAATAAAGAAAAAGAAAGAAGAATACAGTGAAGTGAGGAAAAGGCTCAGGATGGGGAAATCTGGCTCGTGCTTCAAGCTGGTGATGATATGCGGCGGTGATGCGGCGGAGAAGGATGATTGTCTAGCAGCTCAGATCAAGGATTCTAATGATAACCGTGGTTGGAGCTTCCACAAGAAATCTGCAAAGAACCGTGTGCTTAACAATACTGTGATAGCAGAGGCACCATCTGCAAATAAGGGGGGTTCAGAATGTACTAATTTCAATTTTCAACCACTTCCTGAACCTGATGATGCTGAGAAAGTTTACACAACAAAATACTCTGATGAGAAGCCTGAGTTATCCTCCATGGAAAGCTCACAAATCTCGGAAAAAAATGTCATTGAAACTGAGCTTAAGGTGGATGTCAATCCACCAGAATCTTCCGTCATCATCATCCAGGCTGCCATCAGGGTGTTGTTGGCTCAGAGAGACTTGCTACAACTTAGGAATGTAGTGAAATTGCAAGCTGCTGTTCGAGGGCACTTGGTTCGGCAGCATGCTGTAGGAACCCTTCGATGTGTTCAAGCCATTGCAAAAATGCAGGTCCTTGTGCGAGCTCGTTGTGCTAAGCAATTGTGCTCAGAAAGTCATTTAAATGACAAGGATGGCAAAATTTATTCGTCAAGAACTATGGGAAATCATAATAACGTCACCAAATCAAATGTGACGGACAAATACATTGAGAAGCTGCTTAGCAATAGGTTTGCTCGTCAGCTGTTGGAATCAACACCAAGAAACAAACCTATACATGTCAAGTGTGATCCTTCAAAAGCTGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCCGTATCATCAAAGGATTCTATTGGTGACAAAACAAGTTCTCTCACAGAGCAATCAGAAAGTAAAGATAGCACTTATGTATTTCAATTTAAAACAGTTATTTCACCTGAAGTTAATCTCCAGACAGCTGACTCAAAGCCCACCATTAGGGATTCACTTCTACCTTCAAAAGATGAAGAGAAGGCGATTGTTTATGATGTTAATAACTTCAACTTTCAAGCAAGCTGCTCGACACCATCTATTGGGAAAGATGACTCGGAACAGTTTCTGCCCGAGAAGACAGTCTCATATGATGATAAAGTAGCCTCAACAGAACTCAATTCTTTCAAAAATGAAAAATCAACATCAGATGCAAGTGTACCAACAGACCTTAAATCTGTCCCTCAGAAGCCTGAAATTGATGGCGAGCAGCGCAGACGATCTGTGAAAAGATTTGCCACAGACCAACTAGAGGGTGAAGGCAAGAAATCTGGAAATGGATCAAGAAAGGTCAGCAATACAGCATTTATTGCTGCACAGTCAAAATTTGAAGAGCTGAGTTCAATGACAAATTCTAGTAGGACTAGCAGCTTGTCCCGTCAAGATACAGGAATTGAATCACATGCAGACACTTCCTCTTCTGTTGGCAGAAATGCTGCTTATAAATCAAAAGAGTTATCTGACCAGCCTGAACTATCTATTTCTTGCACTCTTGATTCAGCTGACATATCAGAGGTTAGTGCCGTTGAAAATGAGCAAAATGTAAAAGATTTAATAGAAGGGATTGGTAATCTTGAGAACACAATAAACCATGATGTCGAGGCCAATATTTCAGGTAACATTACAGCTTCTAACCTAGCTACCTCTGTTTTGGACAAGTCAGAGGTTGTTGATGGCATCAGTGGCAATATGGTTCAGTCATTGGTGGCTGTGGACTCAACAGAGCCTGTTATTAAGACTGAGAAAAATCCATCTGACCTGCAGAGAGAACAGGCAGAGGATGTTGTGCAAGAATTCAGATCATCTCCGGAAGCTTCACCTAAAAGCCAGATAACCGTTCCTGAATCACAAGGAACACCTTCGAGTCAGGTGTCTATAAAACCTATAGACAGCAAAATTGACAAGACTGGATCTATCACTAAAAGTGAAACCCTGTCAGTGGATAACAAATCGCCTGTAAATGCAAATCATGATTCAGGCTCTAGAGGTAGCAGGGAGCGAGTGTCTAAAGATCAGCAGAGTGGGAAGAGGCGCAATTCATTCGGCTCGGCAAAACCTGATCACATTGATCAAGAGCCTATGGATAATAGAAATAGCCATAATTCTCTACCACATTTCATGCAAGCTACTGAATCTGCTAGGGCGAAGGTCAATGCAAATAACTCCCCAAGATCAAGTCCAGACGTGCATGAGCGAGACATCCAAGTTAAGAAGCGACATTCCTTACCTGGTGCCACTGGTAGACAGGATTCTCCGCGCATCCAACGATCAATGTCTCAAACGCAGCAGGGTGCAAAGGGAAATGGCATACATCCTTCACAAGAGAGAAAATGGCTGAGGTGA 4062 0.4481 MSATEAEKKKEDEEVKGGELLFCGATCWDIIGRRKGSVDGNLVSPSRLRPLAGIDIRFIASGCASCHCVALDVEGRCYTWGRNEKGQLGHGDTIQRDRPTVVSELSKFKIVKAGAGRNHTVVVTEDGNSLAFGWNKHGQLGSGSARNEIESSPVRCLVSEVTYTTCGGDFTVWLSSIEAASILTAGLPQYGQLGHGTDNEYNSKDSSVKLVYEPQPRPRAIAALAGETIVKVACGTNHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWIPRRIDVFQNRNVLPPDAIISAGSVNSSCTAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNIRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPAGQKSSAVPKKVDILEGMHVMSVACGMGHSMVIVDRTNAADRLDQLDIYDGKAFGEVNEPVAKTPVTKQTAKKGAKGAENSKKRKKSKDSSESEEEADAEESDDSEDEANGEAEVKKSRGGKGRGKASKKSGADGKGPSRGRGRPPAAKKSSPTPKTPQAKSGSLDFTFLFSKANQLLGSAFIIKNADMHASDQIKKKKEEYSEVRKRLRMGKSGSCFKLVMICGGDAAEKDDCLAAQIKDSNDNRGWSFHKKSAKNRVLNNTVIAEAPSANKGGSECTNFNFQPLPEPDDAEKVYTTKYSDEKPELSSMESSQISEKNVIETELKVDVNPPESSVIIIQAAIRVLLAQRDLLQLRNVVKLQAAVRGHLVRQHAVGTLRCVQAIAKMQVLVRARCAKQLCSESHLNDKDGKIYSSRTMGNHNNVTKSNVTDKYIEKLLSNRFARQLLESTPRNKPIHVKCDPSKADSAWKWLERWMSVSSKDSIGDKTSSLTEQSESKDSTYVFQFKTVISPEVNLQTADSKPTIRDSLLPSKDEEKAIVYDVNNFNFQASCSTPSIGKDDSEQFLPEKTVSYDDKVASTELNSFKNEKSTSDASVPTDLKSVPQKPEIDGEQRRRSVKRFATDQLEGEGKKSGNGSRKVSNTAFIAAQSKFEELSSMTNSSRTSSLSRQDTGIESHADTSSSVGRNAAYKSKELSDQPELSISCTLDSADISEVSAVENEQNVKDLIEGIGNLENTINHDVEANISGNITASNLATSVLDKSEVVDGISGNMVQSLVAVDSTEPVIKTEKNPSDLQREQAEDVVQEFRSSPEASPKSQITVPESQGTPSSQVSIKPIDSKIDKTGSITKSETLSVDNKSPVNANHDSGSRGSRERVSKDQQSGKRRNSFGSAKPDHIDQEPMDNRNSHNSLPHFMQATESARAKVNANNSPRSSPDVHERDIQVKKRHSLPGATGRQDSPRIQRSMSQTQQGAKGNGIHPSQERKWLR* 1354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1018 1059 - -
Aev08g0215 1353 PANTHER PROTEIN RCC2 6 516 IPR028641 -
Aev08g0215 1353 Gene3D - 6 207 IPR009091 -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1155 1170 - -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1254 1268 - -
Aev08g0215 1353 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 113 123 IPR000408 -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1175 1202 - -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1233 1247 - -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1321 1342 - -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 458 473 - -
Aev08g0215 1353 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 347 400 IPR000408 -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 969 998 - -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 424 527 - -
Aev08g0215 1353 ProSiteProfiles IQ motif profile. 718 747 IPR000048 GO:0005515
Aev08g0215 1353 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 232 242 IPR000408 -
Aev08g0215 1353 Gene3D - 208 405 IPR009091 -
Aev08g0215 1353 Pfam Regulator of chromosome condensation (RCC1) repeat 183 242 IPR000408 -
Aev08g0215 1353 Pfam Regulator of chromosome condensation (RCC1) repeat 351 397 IPR000408 -
Aev08g0215 1353 Pfam Regulator of chromosome condensation (RCC1) repeat 245 281 IPR000408 -
Aev08g0215 1353 Pfam Regulator of chromosome condensation (RCC1) repeat 74 123 IPR000408 -
Aev08g0215 1353 Pfam Regulator of chromosome condensation (RCC1) repeat 126 172 IPR000408 -
Aev08g0215 1353 Pfam Protein of unknown function (DUF4005) 1263 1335 IPR025064 -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1149 1353 - -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1211 1232 - -
Aev08g0215 1353 Pfam IQ calmodulin-binding motif 720 737 IPR000048 GO:0005515
Aev08g0215 1353 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 75 126 IPR000408 -
Aev08g0215 1353 PRINTS Chromosome condensation regulator RCC1 signature 76 92 IPR000408 -
Aev08g0215 1353 PRINTS Chromosome condensation regulator RCC1 signature 248 262 IPR000408 -
Aev08g0215 1353 PRINTS Chromosome condensation regulator RCC1 signature 110 123 IPR000408 -
Aev08g0215 1353 PRINTS Chromosome condensation regulator RCC1 signature 129 145 IPR000408 -
Aev08g0215 1353 PRINTS Chromosome condensation regulator RCC1 signature 232 248 IPR000408 -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 948 963 - -
Aev08g0215 1353 SUPERFAMILY RCC1/BLIP-II 17 400 IPR009091 -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1018 1053 - -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 474 501 - -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 948 1004 - -
Aev08g0215 1353 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 127 177 IPR000408 -
Aev08g0215 1353 MobiDBLite consensus disorder prediction 1269 1298 - -
Aev08g0215 1353 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 180 245 IPR000408 -
Aev08g0215 1353 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 246 301 IPR000408 -
Aev08g0215 1353 Gene3D - 696 747 - -
Aev08g0215 1353 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 387 397 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0215 Aev-Chr8 1208982 1220683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0215 686 1353 IQD Protein Family AT1G19870 36.416 5.23e-88 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0215 - - gmx:100799424 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0215 08 1208982 1220683 Aev08g0215 08 1208982 1220683 ECH