Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0211 ATGCCAGCCGCACTCGGAAAATGCAGCAGGATCCGGCACATCGTGAGGCTCCGCCAGATGCTGCGGCGGTGGCGCAACAAGGCCCGCACATCCGCCCATCGCTCCTCGGATGTGCCGGCGGGACACGTGGCGGTGTGCGTGGGCAGCAACTACCGGAGATTCGTGGTGCGCGCCACCTACCTGAACCACCCGGTCTTCAAGAAGCTGCTTGCTGAGGCAGAGGAAGAGTACGGCTTCTCCAACCATGGGCCCCTCGCCATTCCCTGCGACGAATCCCTTTTCGAGGAACTCCTTCGCTTCATTTCCCGCTCCGAATCCGGAAACCCGACCCGCTCACTGAACCTGCAGGTGGAAGATATCCACAGATACTGCCACGCTGGCATCAGGAATCACAACCTGAACTTGTGGCCCGACTTGAGACCGTTACTCACTCGCGAAACCACCTGGTAA 450 0.6044 MPAALGKCSRIRHIVRLRQMLRRWRNKARTSAHRSSDVPAGHVAVCVGSNYRRFVVRATYLNHPVFKKLLAEAEEEYGFSNHGPLAIPCDESLFEELLRFISRSESGNPTRSLNLQVEDIHRYCHAGIRNHNLNLWPDLRPLLTRETTW* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0211 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 144 IPR003676 GO:0009733
Aev08g0211 149 Pfam Auxin responsive protein 16 100 IPR003676 GO:0009733
Aev08g0211 149 PANTHER SMALL AUXIN-UP RNA-RELATED 7 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0211 Aev-Chr8 1185070 1185519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0211 5 143 Calmodulin-binding Proteins AT4G34750 51.351 1.07e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0211 K14488 - qsu:112012848 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0211 08 1185070 1185519 Aev08g0211 08 1185070 1185519 ECH