Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0209 ATGGCTTTAAGGAAATCCAGTAGTAAGCTTCCTCAAACAGCACTGATCAAGCAAATCCTGAAGAGATGCTCGAGTTTAGGGAGGAAGCAAGGTGGTGGTGGGTATGAATTGGATGTGCCCAAGGGTCACTTTGTGGTGTACGTCGGAGAGAACAGAAGCAGGTACATTGTTCCAATTTCATTCCTGACTCGCCCTGAGTTCCAGACGCTGCTCCATCAGGCAGAGGAAGAGTTTGGCTTTGATCATGAAAGGGGTCTCACCATTCCATGCCAGCAACACGTTTTTGAGGCTCTCACATCCACCCTCGCTCACATCAATCAATGA 324 0.4846 MALRKSSSKLPQTALIKQILKRCSSLGRKQGGGGYELDVPKGHFVVYVGENRSRYIVPISFLTRPEFQTLLHQAEEEFGFDHERGLTIPCQQHVFEALTSTLAHINQ* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0209 107 Pfam Auxin responsive protein 34 101 IPR003676 GO:0009733
Aev08g0209 107 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 102 - -
Aev08g0209 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0209 Aev-Chr8 1167609 1167932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0209 38 98 Calmodulin-binding Proteins AT3G43120 52.459 1.67e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0209 K14488 - gmx:100305700 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0431 05 2987126 2987446 Aev08g0209 08 1167609 1167932 ECH
Aev08g0209 08 1167609 1167932 Aev05g0431 05 2987126 2987446 ECH
Aev08g0209 08 1167609 1167932 Aev08g0209 08 1167609 1167932 ECH
Aev07g0697 07 4467640 4467939 Aev08g0209 08 1167609 1167932 ECH
Aev04g3424 04 32816110 32816430 Aev08g0209 08 1167609 1167932 ECH