LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev08g0180	ATGGTTAATACCGCTGTTGATCCTTCCTCTAACCATAACTCCCCCACTGCCGCCGCCGCCGCCACTTCTGCTTCCGCAGAAACCGTCGCCGTCACAAACAGCCCTACCTTCCCGCGACGAAGCCTGCCTTCTCCATGGGCTCAAGTAGTTCGCGGCCCTGACACTGAGCCGCCCTCTGCCCCGTCACCGTCCTCCTCTGCGGCTGACCAACTGGCGCCGTCCTCCGATCCCTCGCCGCCGGTCGAGAACTCCAATTCAGATGGCGCCGCCGCTACTGCTGTAGATAACTCTGATGCTGATAAGGCTAACAACAATAATGCTGGTGATCGCCCAAAGAAACCAGCGTGGAAGAGGCCCTCCAATGGCGTGGCTGATTCCGGTGCTGCTGTAAATGTAATGGGTGCTGTCTCATGGCCTGCTTTATCGGAGTCCACCAAGCCTTCCGTCAAGTCGACGCCTCAGTCCTCCTCCTCCTCCAACAACAACAACAAGACTGCTTCCGATGGATCACTCTCCACACCTCAGGGGCCTGTTACTCCGCACTCCCCTCAGAAGCAAGCTGCAACTAATGTGAAACCTAATCCTGGTCATGGTGTGGCTAACAGACAAAGAATGGTGAAGCGTGGAGGTGCCAACGGCAATAACATTGGGCATGGTCATGGTCATGGTCATGGTCATGCACAGAGCAGCTTTTCTGCTCCTCAACCACCACCGCCGCCACCCTTTCCGATATTTCAGATCCCTCCGAGCACCTTTGCCAATGGGATACCCGGGGTTCCAGACCCTTCTCCAAGAAATCCTTACAGGAACAACAACTGGGTTCCAAGCCCGCCATTCGGGGGCTTTATGCCGCCAACTATTGAACAGCGCGGTCCCTCTCGCAGGGGTAATTTCGGGCACCATCCACATAACAATTATGGCAACCGGCGTGATCTGGATCGTGGAAACTATCCACATGCTAGAGATGCTCAGGATCGCAAGAATTATCCACATGCTAGAGATGCTCAGGATCGCGGAAATTATCCACATGCTAGAGATCCTCATCTACACCCGCCAAGGCCATATCCAAGCCCCCCGCCACCTAACGCCCCGCCAAATCCAATCATAGGGCCTCAGCCTATGCGACCGTTACCACACCCTGCTGCGTTTCCTCAATACCGTTATTTTCCAACATCACAATTTGAACCCTTTGGGGGTATGCCATTCTTTACACATGGACCTCATCCTGCAATGTTCTTCCCGGTTGCAAAAACACCTTTGACCAATATGATAGTCAACCAAATTGATTATTACTTCAGTGATGCAAATCTTGTGAAAGATGAATTCTTGCGGTCCAACATGGATGACCAAGGTTGGGTCCCAATTTCATTGATCGCAAACTTTCCTCGGGTTAAAAGTTTGACAAGCAACATTGAGGTGATACTGGATTCAATGAGAACTTCTATCGTCGTGGAAGTACAGGGTGACAAGTTGAGGAGGCGCAATGAGTGGGTGAAGTGGTTGTCCTCTGCTCCACGTCGGGCTGATTATGGCTCAGCATCCCCTGGAGGATCGAGTTCCAATAACCCAACAGCTGATTTTGAAAAGATCACTTTGACTGAAGCTACTGCAGAGAGAGTTAATTCCGACCCAACCACAAATGGTGATGGTGTTGTTACTGGGGAACCTTCCAGTCAGTCTGAACTCCCAAACGGTGATGCTACTGGGAGCAGCAATTAA	1719	0.5201	MVNTAVDPSSNHNSPTAAAAATSASAETVAVTNSPTFPRRSLPSPWAQVVRGPDTEPPSAPSPSSSAADQLAPSSDPSPPVENSNSDGAAATAVDNSDADKANNNNAGDRPKKPAWKRPSNGVADSGAAVNVMGAVSWPALSESTKPSVKSTPQSSSSSNNNNKTASDGSLSTPQGPVTPHSPQKQAATNVKPNPGHGVANRQRMVKRGGANGNNIGHGHGHGHGHAQSSFSAPQPPPPPPFPIFQIPPSTFANGIPGVPDPSPRNPYRNNNWVPSPPFGGFMPPTIEQRGPSRRGNFGHHPHNNYGNRRDLDRGNYPHARDAQDRKNYPHARDAQDRGNYPHARDPHLHPPRPYPSPPPPNAPPNPIIGPQPMRPLPHPAAFPQYRYFPTSQFEPFGGMPFFTHGPHPAMFFPVAKTPLTNMIVNQIDYYFSDANLVKDEFLRSNMDDQGWVPISLIANFPRVKSLTSNIEVILDSMRTSIVVEVQGDKLRRRNEWVKWLSSAPRRADYGSASPGGSSSNNPTADFEKITLTEATAERVNSDPTTNGDGVVTGEPSSQSELPNGDATGSSN*	573

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev08g0180	572	ProSiteProfiles	La-type HTH domain profile.	414	503	IPR006630	-
	Aev08g0180	572	PANTHER	LA-RELATED PROTEIN 1B	10	543	-	-
	Aev08g0180	572	CDD	LAM	422	494	-	-
	Aev08g0180	572	Pfam	La domain	424	479	IPR006630	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	232	247	-	-
	Aev08g0180	572	Gene3D	-	413	503	IPR036388	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	304	350	-	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	1	41	-	-
	Aev08g0180	572	SUPERFAMILY	"Winged helix" DNA-binding domain	411	501	IPR036390	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	351	377	-	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	141	191	-	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	507	572	-	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	1	128	-	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	513	572	-	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	140	377	-	-
	Aev08g0180	572	PANTHER	LUPUS LA PROTEIN-RELATED	10	543	IPR045180	-
	Aev08g0180	572	MobiDBLite	consensus disorder prediction	61	104	-	-
	Aev08g0180	572	SMART	la	418	496	IPR006630	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev08g0180	Aev-Chr8	1010118	1013256	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev08g0180	K18757		-	gmx:100775279	518.464

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev08g0180	08	1010118	1013256	Aev08g0180	08	1010118	1013256	ECH
	Aev07g0667	07	4216132	4219202	Aev08g0180	08	1010118	1013256	PCT