Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0140 ATGGGAGATGGTGCAGTGTCATCATCAGGCACCATGATGGAAGCTCCTCCTCCGCCTGAGGGAACACCAATGGACTTTGACTACATGAATGACCTTTTTGGAGAGGGTTGCTGGCTTGCAGCCTCTGCTGATGGATCTGATTTTCTGATGCAAAGTCCTTCCTTTTCAAATCCCCTCTTTGACCCTTGGCCTTCCTTGGATACCAATGACCCTCCTTACAATGGGGAACAACTTGAATCCCAAGAAGCTCCTTTTGTGGACCAACCACTTAGCCAGGACATAGTTAGTGCTGCTGCTGCTAGTTTTAGCCAGAAGCAGTATCACCCTGAAATTCAATCAGTTGAAAGTTCTTCTGAATTGGTCAGAAGGTGGTGGATTGCACCAACATCTAATCCTGCTCCTGGATCTTCTGTAGTGGACAAGCTATTGAGGGCACTCATGTGTATCAAAGATGTGAGCATCAACAAGGATATGCTCATACAAATTTGGGTGCCAGTTAATAGAGGAGGCAGGCAGATTCTTACAACCAATGGTCTTCCTTATTCACTCGAAACCGGGTCTTTAAACCTCGCCAAGTACCGGGAAATCTCTGTGGGATATCATTTCTCTGCTGAGGAGGACTCAAAGGGGTTGGTGCCAGGGTTGCCTGGTAGAGTCTATAGGGAGAGGGTTCCTGAGTGGACTCCTGATGTTAGATTCTTCAGGAGTCATGAGTATCCGCGAGTTGATCATGCTCAGGAGTATGATGTGCGCGGATCCTTAGCTCTTCCAATCTTTGAGCAAGGTAGCAGGAATTGCTTGGGTGTTATTGAGGTTGTGATGACTACCCAGCAGATCAACTACCGGCCCGAACTCGAGAGTGTTTGCAAAGCACTTGAGGCTGTTGATCTTAGAAGCTCCAAACTTCCACCTCTTCAGAGTGTGAAGGCATGCGACAAGTCCTATGAAGCTGCATTGCCCGAGATTCAAGAGGTGTTGAGATCTGCATGTGAAATGCACAAATTACCATTAGCTCAAACTTGGATCCCATGCATCCAACAAGGCAAAGAGGGGTGCCGGCATTCCGAAGATAATTATTTACACTGCATATCTCCGGTGGAGCATGCTTGCTATGTCGGCGATCCGTTGATCAGGTCATTCCATGAGGCTTGTTCTGAGCATCACTTACTTAAAGGTCAAGGTGTTGCCGGGGGAGCATTTATGACAAATCAACCATGCTTCTCAACTGACATAACTTCCTTGAGCAAAATAGACTATCCCCTTTCTCACCATGCAAGGATGTTTGGATTACGGGCTGCCGCTGCAATACGCCTCCGAAGCATCTATAGTAGCACAGATGATTTTGTTCTAGAGTTCTTCTTGCCTGTGAATTGCAACGACAGTGAAGAACAGAAAAAGATGCTCACTTCATTGTCCTTGATCATACAAAGGGTCTGCCACAGCTTGCGGGTTATATCAGATAAGGAGTTGGAGGAAGAAAGTAAATTGTCAGTGGATGAAGTGATAGGCCTTCCAGATGGTAGATTTGCTAGAACTTCAGATTGGACAGAACCAGAGCAGAGTGGTATGGTTGCCTCACTGGGGACTGAAGAGAAATCAAATGGTAGAAGTTTCTTGGAACAACAAGATAATGCTGTTTTACAAGGAAACGTTGAGTCTGTTGGGGAGGGTAACTTATCAGGTGGGGGAACAAGTAAAACAGGAGATAAAAAACGGGCCAAGGCAGAGAAAACTATCACTCTGCAAGTTCTTCAGCAGTATTTTGCTGGAAGCCTAAAAGATGCTGCAAAGAACATTGGTGGTAAGTCCATGTCAAGATTGATTCTTTTCTGGCTAATGCAAACTGTATATAATATTGGAATTGAATTGAATTTTCCAGTTTGTACTACGACGTTGAAAAGGATCTGCCGGCAACATGGGATAAAGCGCTGGCCTTCTCGGAAGATCAAGAAGGTTGGTCACTCCTTGCAGAAGCTTCAACTGGTCATTGACTCGGTCCAAGGTGCCTCTGGTGCATTTCAGATAGACTCCTTCTATTCGAAATTCCCAGATCTAGCTGCTTCTCCAAACTTATCAGGAACAAGCCTCTTCTCAACCCTGAAGCAAAGCGATAATCCAAACTCATTGAGCACCCAACCAGATCGCGGCTCCCTCAGCCCGGAAGGTACATCCAAATCACCCTCATCTTCTTGCAGCCAGAGTTCCATTTCAAGCCATCCATGTTCCAGCTTGGCAGAGCAGCAGCACCACACAAGTAATGATGTAACTGGCAGCAAAGATCACGCCGTCGAAGAAGATTCCGGTGAAGGCGTATTGAAGAGGATCCCAAGTGAAGCAGAACTGAAAAACCTGAGTGAAGATAAAGCACAAGTGTTGCCAAGATCACAGAGCCAGGAAGCAATTGGTCAACACCCTAAAAGTGAGTATGATAGACCCTTGTCAAAAGCCAATTCCAGAGGACCTCAAAAAGAGAACACTTACAGGGTAAAAATCACATATGGAGATGAGAAAGCAAGGTTTAGGATGCCAAAGAATTGGGGTTATGAAAATCTTTTGAAGGAAGTTGGTAGGAGATTTAACATGAGTGACATGAGCAGATTTGATATCAAATATTTAGATGATGACTTTGAGTGGGTTTTGCTAACCTGTGATGCTGATTTGGAAGAGTGCATTGATGTTTGTCAATCTTCTGAGTGCAGCACCATCAAGCTTTCTCTGCAACTTTCTAATCATTGTATGACAAGTTCTTTAGAATTTAGATAA 2763 0.4495 MGDGAVSSSGTMMEAPPPPEGTPMDFDYMNDLFGEGCWLAASADGSDFLMQSPSFSNPLFDPWPSLDTNDPPYNGEQLESQEAPFVDQPLSQDIVSAAAASFSQKQYHPEIQSVESSSELVRRWWIAPTSNPAPGSSVVDKLLRALMCIKDVSINKDMLIQIWVPVNRGGRQILTTNGLPYSLETGSLNLAKYREISVGYHFSAEEDSKGLVPGLPGRVYRERVPEWTPDVRFFRSHEYPRVDHAQEYDVRGSLALPIFEQGSRNCLGVIEVVMTTQQINYRPELESVCKALEAVDLRSSKLPPLQSVKACDKSYEAALPEIQEVLRSACEMHKLPLAQTWIPCIQQGKEGCRHSEDNYLHCISPVEHACYVGDPLIRSFHEACSEHHLLKGQGVAGGAFMTNQPCFSTDITSLSKIDYPLSHHARMFGLRAAAAIRLRSIYSSTDDFVLEFFLPVNCNDSEEQKKMLTSLSLIIQRVCHSLRVISDKELEEESKLSVDEVIGLPDGRFARTSDWTEPEQSGMVASLGTEEKSNGRSFLEQQDNAVLQGNVESVGEGNLSGGGTSKTGDKKRAKAEKTITLQVLQQYFAGSLKDAAKNIGGKSMSRLILFWLMQTVYNIGIELNFPVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGAFQIDSFYSKFPDLAASPNLSGTSLFSTLKQSDNPNSLSTQPDRGSLSPEGTSKSPSSSCSQSSISSHPCSSLAEQQHHTSNDVTGSKDHAVEEDSGEGVLKRIPSEAELKNLSEDKAQVLPRSQSQEAIGQHPKSEYDRPLSKANSRGPQKENTYRVKITYGDEKARFRMPKNWGYENLLKEVGRRFNMSDMSRFDIKYLDDDFEWVLLTCDADLEECIDVCQSSECSTIKLSLQLSNHCMTSSLEFR* 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0140 920 MobiDBLite consensus disorder prediction 753 787 - -
Aev08g0140 920 CDD PB1_NLP 828 907 IPR034891 -
Aev08g0140 920 Gene3D - 827 909 - -
Aev08g0140 920 ProSiteProfiles RWP-RK domain profile. 565 672 IPR003035 -
Aev08g0140 920 MobiDBLite consensus disorder prediction 697 825 - -
Aev08g0140 920 PANTHER PROTEIN NLP8 22 600 IPR045012 GO:0003700
Aev08g0140 920 PANTHER PROTEIN NLP8 626 913 IPR045012 GO:0003700
Aev08g0140 920 MobiDBLite consensus disorder prediction 789 803 - -
Aev08g0140 920 PANTHER PROTEIN NLP4 22 600 - -
Aev08g0140 920 MobiDBLite consensus disorder prediction 1 23 - -
Aev08g0140 920 SMART PB1_new 826 909 IPR000270 GO:0005515
Aev08g0140 920 PANTHER PROTEIN NLP4 626 913 - -
Aev08g0140 920 SUPERFAMILY CAD & PB1 domains 820 910 - -
Aev08g0140 920 Pfam PB1 domain 826 907 IPR000270 GO:0005515
Aev08g0140 920 ProSiteProfiles PB1 domain profile. 826 909 IPR000270 GO:0005515
Aev08g0140 920 MobiDBLite consensus disorder prediction 697 752 - -
Aev08g0140 920 Pfam RWP-RK domain 578 652 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0140 Aev-Chr8 782035 785319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0140 20 911 NLP Transcription Factor Family AT1G20640 46.995 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev08g0140 PB1 1.8e-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0140 - - ahf:112705709 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0140 08 782035 785319 Aev08g0140 08 782035 785319 ECH