Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0132 ATGAAAGGTGCCAAGTCCAAGCCCGAAGCTAGGAAGGCCGATGCCAAGCTTGCGGTGAACAAGAAGGGTGCTCCTGCCACCAAGGGTGGAAGGAAAACTGGAAAGGGGAAGGCAGCCAAGGACCCTAACAAGCCAAAGAGGCCACCAAGTGCCTTCTTCGTTTTCATGGAGGAATTCAGGAAACAGTTCAACAAAGAGCATCCTGACAACAAGGCAGTGTCCGCTGTTGGCAAAGCTGCTGGAGCTAAATGGAAGCAAATGTCTGATGCTGAGAAAGCACCTTATGTGGCAAAGGCTGAGAAACGAAAGGCAGATTATGAGAAGAACATGAGAGCCTATAACAAGAAACAGGCTGAAGGTCCTACTGCTGGAGATGAAGAGGAATCTGAGAAGTCAATATCCGAGGTTAATGATGAAGACGATGATGAGGATGATGATGGCGAGGATGAAGATGACGAGTAG 462 0.487 MKGAKSKPEARKADAKLAVNKKGAPATKGGRKTGKGKAAKDPNKPKRPPSAFFVFMEEFRKQFNKEHPDNKAVSAVGKAAGAKWKQMSDAEKAPYVAKAEKRKADYEKNMRAYNKKQAEGPTAGDEEESEKSISEVNDEDDDEDDDGEDEDDE* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0132 153 SMART hmgende2 44 115 IPR009071 -
Aev08g0132 153 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Aev08g0132 153 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 152 - -
Aev08g0132 153 SUPERFAMILY HMG-box 32 121 IPR036910 -
Aev08g0132 153 Coils Coil 96 116 - -
Aev08g0132 153 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 152 IPR031061 -
Aev08g0132 153 MobiDBLite consensus disorder prediction 1 18 - -
Aev08g0132 153 MobiDBLite consensus disorder prediction 1 50 - -
Aev08g0132 153 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Aev08g0132 153 MobiDBLite consensus disorder prediction 131 153 - -
Aev08g0132 153 CDD HMGB-UBF_HMG-box 45 111 - -
Aev08g0132 153 Gene3D High mobility group box domain 29 135 IPR036910 -
Aev08g0132 153 MobiDBLite consensus disorder prediction 94 130 - -
Aev08g0132 153 MobiDBLite consensus disorder prediction 64 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0132 Aev-Chr8 726766 728345 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Aev08g0132 HMG_box 1.5e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0132 K25507 - gmx:100500173 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0132 08 726766 728345 Aev08g0132 08 726766 728345 ECH