Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0123 ATGAGTCTGCTTTTGATTCTTGGTTGGGTGGTGTTGCACCCCTTTTTGGGAGTATCCGTATCTCCTTATGTTTCGGCTGCAGCAAATGTCTCATCCTCAAGACCAGACACAGTGAACATTGGAGCTATCTTCACCTTCGATTCCACAATTGGGAGAGTGGCTAAGATTGCCATGGAGGAAGCAGTGAAGGATGTGAACGCCAACACTAGCATCCTCCATGGAACTAAACTTGTTCTCCACATGAAGAATTCCAATTGCAGTGGTTTTTGGGGTATGGTTCAAGCTTTGCAGTTCATGGAGACTGATGTAATTGCTATAGTAGGTCCACAGTCTTCTGTAGTAGCCCACATAATATCCCATGTTGCAAATGAGCTCCGGGTTCCTCTGGTGTCATTTGCAGCAACAGACCCCACACTCTCATCCCTGCAGTTCCCATTCTTTGTGAGGACAACACAGAGTGATCTGTACCAAATGACTGCGGTTGCTGAGATCGTTGATTATTACGGTTGGAAGGAGGTGATTGCTATATATGTAGATGATGATTATGGACGAAATGGGGTGGCTGCGTTAGACGATCAGCTGACAGGCAGGCGCTGTAAGATCTCCTACAAGGCAGCGATTAAGGCTGGAGCAGGAGTTGGCAAGGGTGAAATCATGGATTTGCTTGTGAAGGTGGCACTGATGCAATCTCGCGTCATTGTTCTCCATGCAAATGCTGATTCTGGATTTATGGTCTTCAACCTTGCGCATTATCTTGGGATGACCGGGAGCGGTTATGTCTGGATAGCCACCGATTGGCTCTCATCCGTCCTAGATTCCACTCCTCTCCCTTCAGAAACAATGGATGTTCTGCAGGGAGTGCTTGTTTTGCGCCAACATACACCTGATTCTGATATGAAGAAAGCATTCATGTCGCGGTGGAAAAATTTAACTGCTGGCTCTTTGGGGTTGCATTCTTATGGTCTCTATGCTTATGATTCCATTTTTCTGATTGCACGGGCTATTGATGCATTTTTCAGTCAGGGTGGGATTGTCTCGTGTACCAATTACACAAGTTTGGGTGATGATCAAGGAGGTGGTCTTAACCTCGATGCTATGAGCATTTTTGATAATGGAACACTTTTGTTGAATAACATATTGCGGAGTGATTTTGCTGGATTAACAGGTCATGTGAAATTCGAATCCGATAGATGCCTTGGTCGTCCTGCCTATGACGTTCTTAATGTAGTTGGAACCGGCTTTCGTCAGGTTGGTTACTGGTCTAACTATTCTGGTCTGTCAATTGTACCTCCTGAGTCATTGTATGGTAGGCCACCTAATAGATCGAGCGCAAACCAGCACCTTCGTAGCATCATATGGCCTGGAGATACAATATCCAAACCCCGCGGATGGGTCTTCCCAAATAACGGGAAACAATTGAGAATTGGTGTGCCTATCCGAGTCAGTTACCATGAATTTGTTTCGCCGGTGAAGGGAACAGATATGTTCAAAGGTTACTGCATCGATGTATTCACAGCAGCAGTAAACTTGTTGCCATATGCTGTTCCATACCACTTTGTACCATTTGGAAACGGCCGTGAGAACCCAAGCTACACAGAACTTGTCAACTTAATCAGCACTGGTTACTTTGATGGTGCTGTTGGTGACATTGCCATCGTCACAAATCGGACAAAGATAGTAGATTTTACACAGCCGTATGCTGCATCTGGACTTGTCGTCGTCGCTCCTTTTAAGAAGATCAATTCCGGCGGTTGGTCTTTCCTGCAGCCGTTCACTCTTTTTATGTGGACTGTCACTGCTTGTTTCTTCATATTCGTTGGGATAGTTGTATGGATTCTGGAACACAGGATAAATGATGAGTTCAGGGGCCCACCAAAACAGCAACTTATAACCATTTTATGGTTTAGCTTATCAACTCTATTTTTCTCTCACAGAGAAAATACGATGAGTGCGCTTGGGCGGTTGGTGGTTCTCATATGGTTGTTTGTGGTTTTGATCATCAACTCCAGTTACACTGCAAGTTTAACATCCATACTTACTGTGCAGCAGTTATCTTCTCCTATCAGTGGAATAGATAGCTTAAAAGCTAGCGATGAACCAATAGGGTTCCAAGTGGGTTCATTTGCAGAACACTACTTGGCTAAGGATATTGGAATACCAAGATCAAGGCTCATTCCCCTTGGATCTCCTGAAGCATATGCTAAGGCACTCCAGCTTGGTCCTAAGAATGGAGGTGTTGCTGCTATTGTAGATGAGCGACCCTATGTCGAAATCTTTCTATCAAGCCAGTGCACATTCAGGATTGTAGGTCAAGAATTCACCCGAAGTGGCTGGGGTTTTGCATTCCCTCGGGACTCCCCTTTGGCCGTGGATCTATCAACTGCCATCCTACAACTCTCTGAAACCGGTGATCTGCAACGGATTCACGACAAATGGATGACGCGAACCAGCTGCAGTTTGGACAATACTGAAATAGATTCAGATAGGCTTCAACTCAAAAGCTTCTGGGGCCTCTTTCTACTTTGCGGGATCGCTTGCTTCATAGCTCTTGTCATATATTTTCTGCAGATCATGCTACAGCTAAGGCATGCTGCACCTTCTGAACCTGCTTCTAATTCTAACTCCATTTCTGGTCGTTTCCAAAGATTTCTTTCACTGATTGATGAGAAGGAAGACTCATCAAAGAGTGAGAAGAAAAGGAGGAATGGAGAAGAAAGAACAGCTGAAGATCAACTTGGGAGGCATCCAAAGAGGATACAAACCCAATTAAGAACAAATTTAAACATATAA 2790 0.4466 MSLLLILGWVVLHPFLGVSVSPYVSAAANVSSSRPDTVNIGAIFTFDSTIGRVAKIAMEEAVKDVNANTSILHGTKLVLHMKNSNCSGFWGMVQALQFMETDVIAIVGPQSSVVAHIISHVANELRVPLVSFAATDPTLSSLQFPFFVRTTQSDLYQMTAVAEIVDYYGWKEVIAIYVDDDYGRNGVAALDDQLTGRRCKISYKAAIKAGAGVGKGEIMDLLVKVALMQSRVIVLHANADSGFMVFNLAHYLGMTGSGYVWIATDWLSSVLDSTPLPSETMDVLQGVLVLRQHTPDSDMKKAFMSRWKNLTAGSLGLHSYGLYAYDSIFLIARAIDAFFSQGGIVSCTNYTSLGDDQGGGLNLDAMSIFDNGTLLLNNILRSDFAGLTGHVKFESDRCLGRPAYDVLNVVGTGFRQVGYWSNYSGLSIVPPESLYGRPPNRSSANQHLRSIIWPGDTISKPRGWVFPNNGKQLRIGVPIRVSYHEFVSPVKGTDMFKGYCIDVFTAAVNLLPYAVPYHFVPFGNGRENPSYTELVNLISTGYFDGAVGDIAIVTNRTKIVDFTQPYAASGLVVVAPFKKINSGGWSFLQPFTLFMWTVTACFFIFVGIVVWILEHRINDEFRGPPKQQLITILWFSLSTLFFSHRENTMSALGRLVVLIWLFVVLIINSSYTASLTSILTVQQLSSPISGIDSLKASDEPIGFQVGSFAEHYLAKDIGIPRSRLIPLGSPEAYAKALQLGPKNGGVAAIVDERPYVEIFLSSQCTFRIVGQEFTRSGWGFAFPRDSPLAVDLSTAILQLSETGDLQRIHDKWMTRTSCSLDNTEIDSDRLQLKSFWGLFLLCGIACFIALVIYFLQIMLQLRHAAPSEPASNSNSISGRFQRFLSLIDEKEDSSKSEKKRRNGEERTAEDQLGRHPKRIQTQLRTNLNI* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0123 929 Pfam Bacterial extracellular solute-binding proteins, family 3 493 814 IPR001638 -
Aev08g0123 929 Pfam Receptor family ligand binding region 56 411 IPR001828 -
Aev08g0123 929 Gene3D - 744 778 - -
Aev08g0123 929 Pfam Ligand-gated ion channel 815 846 IPR001320 GO:0015276|GO:0016020
Aev08g0123 929 PRINTS Metabotropic glutamate GPCR signature 106 132 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aev08g0123 929 PRINTS Metabotropic glutamate GPCR signature 138 157 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aev08g0123 929 PRINTS Metabotropic glutamate GPCR signature 173 190 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aev08g0123 929 PRINTS Metabotropic glutamate GPCR signature 157 173 IPR000337 GO:0004930|GO:0007186|GO:0016021
Aev08g0123 929 Gene3D - 153 426 - -
Aev08g0123 929 Gene3D - 468 582 - -
Aev08g0123 929 PANTHER GLUTAMATE RECEPTOR 3.3 26 924 - -
Aev08g0123 929 SMART GluR_14 474 815 IPR001320 GO:0015276|GO:0016020
Aev08g0123 929 CDD GluR_Plant 471 812 - -
Aev08g0123 929 SUPERFAMILY Periplasmic binding protein-like I 32 465 IPR028082 -
Aev08g0123 929 MobiDBLite consensus disorder prediction 889 917 - -
Aev08g0123 929 Gene3D - 56 401 - -
Aev08g0123 929 Gene3D - 779 812 - -
Aev08g0123 929 PIRSF IGluLR_plant 8 928 IPR017103 -
Aev08g0123 929 Gene3D - 583 711 - -
Aev08g0123 929 CDD PBP1_GABAb_receptor_plant 39 430 IPR044440 -
Aev08g0123 929 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 26 924 - -
Aev08g0123 929 MobiDBLite consensus disorder prediction 889 920 - -
Aev08g0123 929 SUPERFAMILY Periplasmic binding protein-like II 450 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0123 Aev-Chr8 681694 685215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0123 32 901 Ion Channels AT1G42540 65.760 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0123 K05387 - gmx:100777478 1524.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0123 08 681694 685215 Aev08g0123 08 681694 685215 ECH