Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0113 ATGACTCGTCAACTGAGATTATTAGGCGAGCGCAACTCGTCCGCCACCGACTCCCCCGATTCCGCCGTCGTCGATTCCGACTTCGTTGTCATCCTCGCCGCACTAATCTGCGCCCTCATCTGCGTCCTCGGCCTCGTCGCCGTCGCCCGCTGCGCCTGTCTCCGCCGCCTCCGCCTCTCTTCATCCTCCGCCTCCGCTCAGCCTTCTCCTTCGCTTCCCGCCGCCGCCAACAAAGGCGTCAAGAAGAAGGTCTTGCGCTCCCTCCCCAAGCTCACCGCCACCGCCGAATCCGCCGGCAAGTTCTCCGACTGCGCGATCTGCCTCTCGGAGTTCACCGCCGGTGACGAAATTCGAGTGCTGCCTCAGTGCGGCCACGGCTTCCACGTTTCCTGCATCGACGCGTGGCTGAGATCGCATTCCTCGTGCCCTTCGTGCCGTCAGATTCTGATGGCTCCAAGGTGCGACAAGTGCGGTGGTATTCCCGCCACCGCGAGCTCCAGCAGCGCCACCGCACCTCAAGCACAGGATCCTGAGGCTAGATTCAAGGTAAGCGATGACGATCCCCATAGGTTCTTACCTTAG 582 0.6237 MTRQLRLLGERNSSATDSPDSAVVDSDFVVILAALICALICVLGLVAVARCACLRRLRLSSSSASAQPSPSLPAAANKGVKKKVLRSLPKLTATAESAGKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILMAPRCDKCGGIPATASSSSATAPQAQDPEARFKVSDDDPHRFLP* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0113 193 MobiDBLite consensus disorder prediction 179 193 - -
Aev08g0113 193 MobiDBLite consensus disorder prediction 163 193 - -
Aev08g0113 193 PANTHER RING-H2 FINGER PROTEIN ATL8 1 183 - -
Aev08g0113 193 SUPERFAMILY RING/U-box 89 152 - -
Aev08g0113 193 Pfam Ring finger domain 103 146 IPR001841 -
Aev08g0113 193 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Aev08g0113 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 151 IPR013083 -
Aev08g0113 193 CDD RING-H2_PA-TM-RING 103 146 - -
Aev08g0113 193 SMART ring_2 104 145 IPR001841 -
Aev08g0113 193 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0113 Aev-Chr8 645918 646499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0113 1 193 C3H Transcription Factor Family AT1G20823 59.901 1.66e-67 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0113 - - gmx:100794614 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0113 08 645918 646499 Aev08g0113 08 645918 646499 ECH