Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0109 ATGTCTGGATCTGAGATGGGGAGCAGGGAACCCTTCACCGTTGATCTCCACAACATGCGTTTGGACTATGCTCCTACTGCTGCTGATGGCACTCCTCTCTACAGCAACCCGCTTCAGCCCAATTCTTCTCCGACCTTCCACCCCTCCACAGCAGTCACTGCTGCGCCGATCAACATCAACGGCGGCGGAACTGCTGGCGAATCGATGGCCATGACCCAGGCCCACGTGGGAAGCAGCGCCGAGCCCAAGAAGAAGAGGGGGAGGCCCAGGAAGTACGGGCCCGATGGGAGGGTTGGCCCTACCTCTCCTGCTGTGGGCCTAAACAATAACCTGTCCGGTGGAGGAGCGGTTTCGCCGGGAATTGCTTCTGCACCGACCAACGCCATTAAGAGAAGGGGAAGACCTCGCGGCTCTCGCAATAAGCATCGTATCTCTAGGGGATCAGGGAAAGTTCCCTTTTCAACACATGTTATCACTGTGAAAACTGGAGAGGACTTGACAGTAAAGATTGCGTCACTCACCACAACTGGTCCAAGAAATGTTTGCATCTTATCAGCAAATGGAACCATATCTAATGTGACACTTAGCCAGCCTACAGTATCTGGACGAACTGTGACTTATGAGGGACGATTTGAGATCCTGGCACTCCGTGGTACTTTGTTTCTTTCTGGAGATGGTCATTATCAGAGTCCTGGTGGCTTAAGTTTGACCTTGGCAGGGCCAGATGGACGGGTTCTGGGTGGTGGCATTGTAGGTGTTTGTATAGCTGCTTCCCCTATTCAGATAGTTTTAATGAGCTTTGCTATGCCGGGCCGCAAGGGTTATGTTTCGGCAAACCAGACGGAAAACTTATCTGCCCCACCCACGGCAGGCCAAAGCAGTTCTCCATCACGAGGTACATTTAGTGAATCTTCTGGTGAAGAAGGGAGCCCTCTTGACCTGAGTGCAGAAGCCTGCAATGACAACAACACCCCGCACGGTGGCATTTCAGGCATGCCCTGGAAGTGA 1008 0.5298 MSGSEMGSREPFTVDLHNMRLDYAPTAADGTPLYSNPLQPNSSPTFHPSTAVTAAPININGGGTAGESMAMTQAHVGSSAEPKKKRGRPRKYGPDGRVGPTSPAVGLNNNLSGGGAVSPGIASAPTNAIKRRGRPRGSRNKHRISRGSGKVPFSTHVITVKTGEDLTVKIASLTTTGPRNVCILSANGTISNVTLSQPTVSGRTVTYEGRFEILALRGTLFLSGDGHYQSPGGLSLTLAGPDGRVLGGGIVGVCIAASPIQIVLMSFAMPGRKGYVSANQTENLSAPPTAGQSSSPSRGTFSESSGEEGSPLDLSAEACNDNNTPHGGISGMPWK* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0109 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 268 - -
Aev08g0109 335 MobiDBLite consensus disorder prediction 72 103 - -
Aev08g0109 335 MobiDBLite consensus disorder prediction 281 309 - -
Aev08g0109 335 Gene3D - 154 282 - -
Aev08g0109 335 MobiDBLite consensus disorder prediction 132 146 - -
Aev08g0109 335 CDD DUF296 155 267 IPR005175 -
Aev08g0109 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10-LIKE ISOFORM X1 14 333 - -
Aev08g0109 335 MobiDBLite consensus disorder prediction 116 150 - -
Aev08g0109 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 14 333 IPR039605 GO:0003680
Aev08g0109 335 MobiDBLite consensus disorder prediction 281 335 - -
Aev08g0109 335 SMART AT_hook_2 83 95 IPR017956 GO:0003677
Aev08g0109 335 SMART AT_hook_2 129 141 IPR017956 GO:0003677
Aev08g0109 335 MobiDBLite consensus disorder prediction 25 45 - -
Aev08g0109 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 267 IPR005175 -
Aev08g0109 335 ProSiteProfiles PPC domain profile profile. 150 288 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0109 Aev-Chr8 611327 615323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0109 29 335 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 43.902 1.12e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0109 - - ahf:112705741 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0109 08 611327 615323 Aev08g0109 08 611327 615323 ECH