Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0106 ATGAACTCGCCTTTCGGCGACACCACATACACCAAGGTCTTCGTTGGGGGATTGGCCTGGGAGACTCAGAGCGAAACCATGCGCCGTTACTTCGAGCAGTTCGGTGACATTCTCGAGGCCGTCGTCATCACTGATAAGAACACAGGCCGATCCAAAGGCTATGGTTTTGTGACTTTCCGGGATCCTGAGGCTGCTAGGAGAGCCTGTACTGATCCAACTCCGATCATTGATGGCAGAAGGGCCAATTGTAACTTGGCTTCACTTGGCCGGCCACGCCCTCCCATGCCTTATGGACGGATACGACCAGCCTCCCCTTATGTTGGAGGTATGCAACCAGCACGGGGTGCTTTTGTTGGAGGTTTTGGCTATCAGCAACCAATTTCCTACGGCTATCAGCAAGGAATGGTTTATCCTCCTTATGGGTATACGACATATGGACCTGAATACATCTACCCACAGAGTCTGTACAACCCATATGCGGGCCAACAGTACCTTCAGATATATGGAGTGCCTGGGGCAGTGAATACAACTGTTTATCCTTATGGACAACTGGGTCAAACTATTCCTAGTGGCCATGGTTATGCAGCAATGCAAGGCTATGCAGTACCAGGCCATCAGATCGTGCCCTATGGTGGTTCTAATGTTAATGCCATGACAACTTCACCTATGCATGCCATTCAAACACCATATCCTAGTGGAATTGCTGCACCTGTTCCAGGCCAGCCGCAATTTATTGTTCCTGCTCCTTCTCCACAATTTATTCAAGGTAGCGGTCCTGACCAAACAGCCGGGTCATATATAGTCATGCTCACCAGGTTGTGTCTGAGTCAGCTCCAGATGGCGAAGGAAACTGGAATGTTCCATTTGGACATTTACATTAGTGTATTTATACCTGATACTGCTGCTTCTCAGGAAGAGTTGCAGTAG 927 0.4919 MNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACTDPTPIIDGRRANCNLASLGRPRPPMPYGRIRPASPYVGGMQPARGAFVGGFGYQQPISYGYQQGMVYPPYGYTTYGPEYIYPQSLYNPYAGQQYLQIYGVPGAVNTTVYPYGQLGQTIPSGHGYAAMQGYAVPGHQIVPYGGSNVNAMTTSPMHAIQTPYPSGIAAPVPGQPQFIVPAPSPQFIQGSGPDQTAGSYIVMLTRLCLSQLQMAKETGMFHLDIYISVFIPDTAASQEELQ* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0106 308 Gene3D - 2 100 IPR012677 -
Aev08g0106 308 SUPERFAMILY RNA-binding domain, RBD 10 124 IPR035979 GO:0003676
Aev08g0106 308 SMART rrm1_1 12 84 IPR000504 GO:0003723
Aev08g0106 308 PANTHER RNA-BINDING PROTEIN 38-LIKE ISOFORM X1 1 261 - -
Aev08g0106 308 PANTHER BOULE-RELATED 1 261 IPR037366 GO:0003729
Aev08g0106 308 CDD RRM_RBM24_RBM38_like 11 86 - -
Aev08g0106 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 68 IPR000504 GO:0003723
Aev08g0106 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 88 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0106 Aev-Chr8 601933 605082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0106 1 165 C2H2 Transcription Factor Family AT2G19380 31.073 5.34e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0106 - - aprc:113864528 507.679