Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0103 ATGAGATCAGATCAGGAAGGAAAGCTGGGAAACAATAATCAGAATTGGAGCAGCAAGTGGTGGGAGACGAGAAGCACAGGTGATGAAGGAATGGCGGCCTACAGCAGCAACAACGGAAACAACAACCCCAACAACCAGAACCGCCACAATGAAGATGAGTTGCGATTAGGGCGGTTTGTGCCAGAACAAGCATTCAACCTGCACCTCCAAACCCCTAACAACAACAACAACAACCATGACGCCGACGACACCCCGACACCCCCTCCTCCTGAGGGAGGCTCCTCCATGCGCCGCCCACGTGGCCGCCCCGCTGGGTCCAAGAACAAGCCGAAGGCACCCATCATCGTGACGCGTGACAGCCCCAACACACTCCGCTCTCACGTCTTCGAGGTCTCCAACGGCACCGAGCTCCTCGAAACCCTCTCCACCTACGCCCGCCGCAGGGGCAGGGGCCTCTCCGTCTTCAGCGGCACCGGCGCTATCGCCAACGTCACTCTTCGCCAGCCTGGAGGCACCGTCGTCACCCTCCACGGCCGCTTCGAGATCCTCTCCATTTCCGGGACGGTGCTCCCTCCGCCGGCGCCCCCGGGAGCGGGGGGTTTGTCGGTGTACCTGTCGGGCGGGCAGGGGCAGGTTGTTGGGGGCAACGCCGTGGCCCCTCTGGTGGCGTCGGGTGCGGTGGTTCTGATGGCGGCTTCATTTGCTAATGCAATGTTTGAGAGGCTTCCCTTGGCACTTGATGATGACCATGATGTCGATGTTGATCTTGATGTTGATGACCACATCCATCACCAGCATCACCCTGCGCCCTCCCAGTCTTCCGGCGTCACCGGGCTCCTCGGAGAAGGCGGTGGCGGCGTTCCTCTCTTCAGTGCGGCGGCAGCAGGAGGAAGGAACGTTAACCGGAGCAGCTATCCGTTTCCGGTTCCGGGCATCAGCGGCGATCTATTTGGATGGGGTGGCGGAGCAAGTGGAAGTGGAAGTGGTAATGCTAATGCACCACCGGAAATCAAGCCTGCTCCTCCTCCTCCATTCTAG 1038 0.6031 MRSDQEGKLGNNNQNWSSKWWETRSTGDEGMAAYSSNNGNNNPNNQNRHNEDELRLGRFVPEQAFNLHLQTPNNNNNNHDADDTPTPPPPEGGSSMRRPRGRPAGSKNKPKAPIIVTRDSPNTLRSHVFEVSNGTELLETLSTYARRRGRGLSVFSGTGAIANVTLRQPGGTVVTLHGRFEILSISGTVLPPPAPPGAGGLSVYLSGGQGQVVGGNAVAPLVASGAVVLMAASFANAMFERLPLALDDDHDVDVDLDVDDHIHHQHHPAPSQSSGVTGLLGEGGGGVPLFSAAAAGGRNVNRSSYPFPVPGISGDLFGWGGGASGSGSGNANAPPEIKPAPPPPF* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0103 345 Gene3D - 124 258 - -
Aev08g0103 345 CDD DUF296 125 190 IPR005175 -
Aev08g0103 345 MobiDBLite consensus disorder prediction 323 345 - -
Aev08g0103 345 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 63 311 - -
Aev08g0103 345 MobiDBLite consensus disorder prediction 1 47 - -
Aev08g0103 345 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 63 311 IPR014476 GO:0003680
Aev08g0103 345 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 243 - -
Aev08g0103 345 MobiDBLite consensus disorder prediction 1 49 - -
Aev08g0103 345 MobiDBLite consensus disorder prediction 68 114 - -
Aev08g0103 345 MobiDBLite consensus disorder prediction 68 82 - -
Aev08g0103 345 ProSiteProfiles PPC domain profile profile. 121 259 IPR005175 -
Aev08g0103 345 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 235 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0103 Aev-Chr8 588858 589895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0103 74 244 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 65.934 1.44e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0103 - - aip:107609871 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0103 08 588858 589895 Aev08g0103 08 588858 589895 ECH