Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev08g0102 | ATGGAGGATGGTGAGAGGTTAGGGGATAACTCCCATGGAAGTTCCGGTATGGAGCGCCAGAATTCTACTGTCTCGGAAAAGGATCATCAGAATGTGGATTCCTCTGCTCACGTGCCTGCTCCCAAGTCCCCTGCTCAGCTACAAGTACACCAAGATCAGATGATGCTTGATCAGGTTGATATCAACAAAAACGGCGATTCTGCTCCTGTACTTCCTCCCGAGTCCAGGATAGAGAGCAACAACACACACCACCAGAATCAGTTCCAAGATGCTAAAACCCCTTCGCACCAAGAATTGCTCACTCCGAAGCCTAAAGAAAGGAATGTTAGGGAAATGAAGAACGTGATGAATGATACCGAGATGGCTGATTACGACGAGTCTGGCTCGATTTCGGAACGAGAAGCATTTATGAGAGAGCTGGAGACTTTCTACAGGGACAGGTCATTGGAATTCAAGCCTCCTAAGTTTTATGGGGAGCCACTAAATTGCCTTAAGTTATGGAGAGCTGTTATCAGACTAGGTGGCTATGACGTGGTAACTACATCCAAGTTGTGGCGGCAAGTAGGAGAGTCTTTCCACCCCCCAAAGACTTGCACAACAGTCTCATGGACATTTAGAATCTTTTACGAGAAGGCACTTTTAGAGTATGAGAAGTATAAGAGAGAAAATGGAGAGCTACAGCTCCCTGTTGGATCATTCCATCAGTCTTCAAGCGTGGAGAAAGAGGCCACTGTTTTGCAGGCTCCAGGCTCTGGCTCTGGCAGGGCACGGAGGGATGCAGCAGCACGTGCAATGCAAGGTTGGCATGCTCAGCGCCTTCTTGGATATGGTGAGGTTGCCGAGCCAGTTATTAAGGATAAGAACTCCAGTTCCACCGCAAAACGTGAAAAGAACCTCAAAAGCATTGGTGTGATTAATAAACAGAGGACACCATCTGGTCTTGAGCATGCTGAGAAAGCTGCCAATATCGAAGGAGATAGGCAATTGGCTGCAGCAGTTGTGGATATTGGACCCCCAGCTGACTGGGTGAAGATAAATGTGCGGGAAACTAAGGATTGTTTTGAGGTGTATGCACTGGTTCCTGGGCTCCTTCGTGAGGAGGTGCGAGTCCAATCAGATCCAGTTGGACGTCTTGTTATAACGGGTCTGCCGGAGCATGTTGACAATCCATGGGGAATTACCCCTTTCAAAAAGGTTGTGAACTTACCTGCAAGAATTGATCCGCTTCAGACATCTGCTGTCGTTAGTTTGCATGGCCGCCTATTTGTACGCGTTCCCTTTGAGCAGGGAGCTGTGTAA | 1299 | 0.4811 | MEDGERLGDNSHGSSGMERQNSTVSEKDHQNVDSSAHVPAPKSPAQLQVHQDQMMLDQVDINKNGDSAPVLPPESRIESNNTHHQNQFQDAKTPSHQELLTPKPKERNVREMKNVMNDTEMADYDESGSISEREAFMRELETFYRDRSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTTSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKYKRENGELQLPVGSFHQSSSVEKEATVLQAPGSGSGRARRDAAARAMQGWHAQRLLGYGEVAEPVIKDKNSSSTAKREKNLKSIGVINKQRTPSGLEHAEKAANIEGDRQLAAAVVDIGPPADWVKINVRETKDCFEVYALVPGLLREEVRVQSDPVGRLVITGLPEHVDNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV* | 433 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev08g0102 | 432 | MobiDBLite | consensus disorder prediction | 74 | 96 | - | - | |
Aev08g0102 | 432 | PANTHER | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT | 23 | 429 | IPR045147 | GO:0006357 | |
Aev08g0102 | 432 | SUPERFAMILY | HSP20-like chaperones | 340 | 427 | IPR008978 | - | |
Aev08g0102 | 432 | Pfam | ARID/BRIGHT DNA binding domain | 132 | 217 | IPR001606 | GO:0003677 | |
Aev08g0102 | 432 | ProSiteProfiles | ARID domain profile. | 130 | 221 | IPR001606 | GO:0003677 | |
Aev08g0102 | 432 | CDD | ACD_sHsps_p23-like | 347 | 426 | - | - | |
Aev08g0102 | 432 | ProSiteProfiles | Small heat shock protein (sHSP) domain profile. | 331 | 432 | IPR002068 | - | |
Aev08g0102 | 432 | PANTHER | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 | 23 | 429 | - | - | |
Aev08g0102 | 432 | SUPERFAMILY | ARID-like | 125 | 227 | IPR036431 | GO:0003677 | |
Aev08g0102 | 432 | Gene3D | - | 332 | 431 | IPR008978 | - | |
Aev08g0102 | 432 | CDD | ARID | 132 | 217 | - | - | |
Aev08g0102 | 432 | SMART | ARID_2 | 127 | 217 | - | - | |
Aev08g0102 | 432 | MobiDBLite | consensus disorder prediction | 1 | 98 | - | - | |
Aev08g0102 | 432 | SMART | bright_3 | 131 | 222 | IPR001606 | GO:0003677 | |
Aev08g0102 | 432 | MobiDBLite | consensus disorder prediction | 46 | 60 | - | - | |
Aev08g0102 | 432 | Gene3D | - | 130 | 230 | IPR036431 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev08g0102 | Aev-Chr8 | 578944 | 584076 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev08g0102 | 17 | 429 | ARID Transcription Factor Family | AT1G76510 | 60.145 | 1.76e-161 | 460 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | ARID | Aev08g0102 | ARID | 8.2e-17 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev08g0102 | - | - | adu:107461292 | 687.952 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev08g0102 | 08 | 578944 | 584076 | Aev08g0102 | 08 | 578944 | 584076 | ECH |