Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0102 ATGGAGGATGGTGAGAGGTTAGGGGATAACTCCCATGGAAGTTCCGGTATGGAGCGCCAGAATTCTACTGTCTCGGAAAAGGATCATCAGAATGTGGATTCCTCTGCTCACGTGCCTGCTCCCAAGTCCCCTGCTCAGCTACAAGTACACCAAGATCAGATGATGCTTGATCAGGTTGATATCAACAAAAACGGCGATTCTGCTCCTGTACTTCCTCCCGAGTCCAGGATAGAGAGCAACAACACACACCACCAGAATCAGTTCCAAGATGCTAAAACCCCTTCGCACCAAGAATTGCTCACTCCGAAGCCTAAAGAAAGGAATGTTAGGGAAATGAAGAACGTGATGAATGATACCGAGATGGCTGATTACGACGAGTCTGGCTCGATTTCGGAACGAGAAGCATTTATGAGAGAGCTGGAGACTTTCTACAGGGACAGGTCATTGGAATTCAAGCCTCCTAAGTTTTATGGGGAGCCACTAAATTGCCTTAAGTTATGGAGAGCTGTTATCAGACTAGGTGGCTATGACGTGGTAACTACATCCAAGTTGTGGCGGCAAGTAGGAGAGTCTTTCCACCCCCCAAAGACTTGCACAACAGTCTCATGGACATTTAGAATCTTTTACGAGAAGGCACTTTTAGAGTATGAGAAGTATAAGAGAGAAAATGGAGAGCTACAGCTCCCTGTTGGATCATTCCATCAGTCTTCAAGCGTGGAGAAAGAGGCCACTGTTTTGCAGGCTCCAGGCTCTGGCTCTGGCAGGGCACGGAGGGATGCAGCAGCACGTGCAATGCAAGGTTGGCATGCTCAGCGCCTTCTTGGATATGGTGAGGTTGCCGAGCCAGTTATTAAGGATAAGAACTCCAGTTCCACCGCAAAACGTGAAAAGAACCTCAAAAGCATTGGTGTGATTAATAAACAGAGGACACCATCTGGTCTTGAGCATGCTGAGAAAGCTGCCAATATCGAAGGAGATAGGCAATTGGCTGCAGCAGTTGTGGATATTGGACCCCCAGCTGACTGGGTGAAGATAAATGTGCGGGAAACTAAGGATTGTTTTGAGGTGTATGCACTGGTTCCTGGGCTCCTTCGTGAGGAGGTGCGAGTCCAATCAGATCCAGTTGGACGTCTTGTTATAACGGGTCTGCCGGAGCATGTTGACAATCCATGGGGAATTACCCCTTTCAAAAAGGTTGTGAACTTACCTGCAAGAATTGATCCGCTTCAGACATCTGCTGTCGTTAGTTTGCATGGCCGCCTATTTGTACGCGTTCCCTTTGAGCAGGGAGCTGTGTAA 1299 0.4811 MEDGERLGDNSHGSSGMERQNSTVSEKDHQNVDSSAHVPAPKSPAQLQVHQDQMMLDQVDINKNGDSAPVLPPESRIESNNTHHQNQFQDAKTPSHQELLTPKPKERNVREMKNVMNDTEMADYDESGSISEREAFMRELETFYRDRSLEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTTSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKYKRENGELQLPVGSFHQSSSVEKEATVLQAPGSGSGRARRDAAARAMQGWHAQRLLGYGEVAEPVIKDKNSSSTAKREKNLKSIGVINKQRTPSGLEHAEKAANIEGDRQLAAAVVDIGPPADWVKINVRETKDCFEVYALVPGLLREEVRVQSDPVGRLVITGLPEHVDNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0102 432 MobiDBLite consensus disorder prediction 74 96 - -
Aev08g0102 432 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 23 429 IPR045147 GO:0006357
Aev08g0102 432 SUPERFAMILY HSP20-like chaperones 340 427 IPR008978 -
Aev08g0102 432 Pfam ARID/BRIGHT DNA binding domain 132 217 IPR001606 GO:0003677
Aev08g0102 432 ProSiteProfiles ARID domain profile. 130 221 IPR001606 GO:0003677
Aev08g0102 432 CDD ACD_sHsps_p23-like 347 426 - -
Aev08g0102 432 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 331 432 IPR002068 -
Aev08g0102 432 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 23 429 - -
Aev08g0102 432 SUPERFAMILY ARID-like 125 227 IPR036431 GO:0003677
Aev08g0102 432 Gene3D - 332 431 IPR008978 -
Aev08g0102 432 CDD ARID 132 217 - -
Aev08g0102 432 SMART ARID_2 127 217 - -
Aev08g0102 432 MobiDBLite consensus disorder prediction 1 98 - -
Aev08g0102 432 SMART bright_3 131 222 IPR001606 GO:0003677
Aev08g0102 432 MobiDBLite consensus disorder prediction 46 60 - -
Aev08g0102 432 Gene3D - 130 230 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0102 Aev-Chr8 578944 584076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0102 17 429 ARID Transcription Factor Family AT1G76510 60.145 1.76e-161 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Aev08g0102 ARID 8.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0102 - - adu:107461292 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0102 08 578944 584076 Aev08g0102 08 578944 584076 ECH