Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0091 ATGTCGTCCGTGACGGAGCTGAAGGAGCGTCACTTGGCCGCCACGCAGACCGTCAACAACCTCCGCGACCGCTTGAAGCAGAGGCGTCTTTCTTTGCTCGATACTGATATTGCTGGTTACGCCAGGTCTCAAGGTAGAACCCCTGTCACTTTTGGACCCACCGATCTCGTTTGCTGTAGAACGCTCCAAGGACATACTGGAAAGGTGTATGCATTGGATTGGACTTCAGAAAAGAATCGAATTGTTAGTGCATCCCAAGATGGTCGATTAATAGTCTGGAATGCATTAACAAGCCAGAAAACTCATGCCATAAAGCTGCCTTGTGCATGGGTCATGACCTGTGCCTTTTCACCCACTGGTCAATCTGTTGCATGTGGTGGCCTTGATAGTGTTTGCTCTATTTTCAATCTGAATTCCCCCACTGACAGGGATGGGAATCTAACTGTTTCAAGGATGCTAAGTGGGCATAAAGGTTATGTTTCCTCCTGTCAGTATGTTCCAGATGAAGACACTCATCTAATTACTGGTTCTGGTGATCAGACATGTGTTTTGTGGGATATTACTACTGGCCTTAGGACATCTGTTTTTGGGGGTGAATTTCAGTCTGGACACACTGCAGATGTACTTAGCATTTCCATTAATGGATCCAACTCAAGAATGTTTGTATCCGGTTCCTGTGATGCAACTGCCCGGTTGTGGGATACTCGTGTGGCAAGTCGTGCAGTGCGGACATTTCACGGGCATGAGGGAGATGTTAATTCTGTCAAATTCTTTCCAGACGGGAATAGATTTGGAACTGGCTCAGATGATGGAACCTGCAGATTATTTGACATTAGGACTGGCCACCAACTTCAAGTATATCAGCAGCAGCATGGTGAAAATGGCATTGCGCAGGTGACATCAATTGCATTCTCCACATCTGGAAGACTCCTTTTTGCTGGATACACAAATGGCGATTGCAATGTTTGGGATACTTTATTGGCAAAGGTGGTCTTGAATTTAGGATCTCTCCAAAACTCTCATGAAGGCAGGATCAGCTGTTTAGGCTTGTCAGCTGATGGAAGTGCCTTGTGTACTGGAAGTTGGGACACAAACTTAAAGATATGGGCATTTGGAGGGCATAGGAAGAGGGCCGTGCTTGTTTGTCTTGTGATGGTAAATTTGGAGGAATCCGCGGGGAAAGGTTACTATGGAACTTTTGCAGCACACTTGTTCTCCCCGTTCTCATTGTCATTGGTCCGTGTTGCTGTTTCATCCTAG 1260 0.4627 MSSVTELKERHLAATQTVNNLRDRLKQRRLSLLDTDIAGYARSQGRTPVTFGPTDLVCCRTLQGHTGKVYALDWTSEKNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPTGQSVACGGLDSVCSIFNLNSPTDRDGNLTVSRMLSGHKGYVSSCQYVPDEDTHLITGSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSISINGSNSRMFVSGSCDATARLWDTRVASRAVRTFHGHEGDVNSVKFFPDGNRFGTGSDDGTCRLFDIRTGHQLQVYQQQHGENGIAQVTSIAFSTSGRLLFAGYTNGDCNVWDTLLAKVVLNLGSLQNSHEGRISCLGLSADGSALCTGSWDTNLKIWAFGGHRKRAVLVCLVMVNLEESAGKGYYGTFAAHLFSPFSLSLVRVAVSS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0091 419 ProSitePatterns Trp-Asp (WD) repeats signature. 173 187 IPR019775 -
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 281 - -
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 153 190 - -
Aev08g0091 419 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA 3 374 IPR016346 GO:0007165
Aev08g0091 419 CDD WD40 58 370 - -
Aev08g0091 419 Pfam WD domain, G-beta repeat 58 94 IPR001680 GO:0005515
Aev08g0091 419 Pfam WD domain, G-beta repeat 151 186 IPR001680 GO:0005515
Aev08g0091 419 Pfam WD domain, G-beta repeat 340 369 IPR001680 GO:0005515
Aev08g0091 419 Pfam WD domain, G-beta repeat 285 324 IPR001680 GO:0005515
Aev08g0091 419 Pfam WD domain, G-beta repeat 242 277 IPR001680 GO:0005515
Aev08g0091 419 Pfam WD domain, G-beta repeat 202 234 IPR001680 GO:0005515
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 286 IPR001680 GO:0005515
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats profile. 153 195 IPR001680 GO:0005515
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats profile. 338 369 IPR001680 GO:0005515
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 243 IPR001680 GO:0005515
Aev08g0091 419 SMART WD40_4 55 94 IPR001680 GO:0005515
Aev08g0091 419 SMART WD40_4 97 136 IPR001680 GO:0005515
Aev08g0091 419 SMART WD40_4 280 324 IPR001680 GO:0005515
Aev08g0091 419 SMART WD40_4 146 186 IPR001680 GO:0005515
Aev08g0091 419 SMART WD40_4 238 277 IPR001680 GO:0005515
Aev08g0091 419 SMART WD40_4 330 370 IPR001680 GO:0005515
Aev08g0091 419 SMART WD40_4 193 234 IPR001680 GO:0005515
Aev08g0091 419 Coils Coil 4 24 - -
Aev08g0091 419 Gene3D - 3 370 IPR015943 GO:0005515
Aev08g0091 419 PIRSF GNBP_B 1 372 - -
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 338 369 - -
Aev08g0091 419 PRINTS G protein beta WD-40 repeat signature 81 95 IPR020472 -
Aev08g0091 419 PRINTS G protein beta WD-40 repeat signature 221 235 IPR020472 -
Aev08g0091 419 PRINTS G protein beta WD-40 repeat signature 173 187 IPR020472 -
Aev08g0091 419 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN, BETA SUBUNIT-RELATED 3 374 - -
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 201 236 - -
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 62 94 - -
Aev08g0091 419 PRINTS Beta G protein (transducin) signature 100 115 IPR001632 -
Aev08g0091 419 PRINTS Beta G protein (transducin) signature 62 78 IPR001632 -
Aev08g0091 419 PRINTS Beta G protein (transducin) signature 81 95 IPR001632 -
Aev08g0091 419 PRINTS Beta G protein (transducin) signature 118 135 IPR001632 -
Aev08g0091 419 SUPERFAMILY WD40 repeat-like 55 369 IPR036322 GO:0005515
Aev08g0091 419 ProSiteProfiles Trp-Asp (WD) repeats profile. 62 103 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0091 Aev-Chr8 515114 518175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0091 93 324 U-box Gene Family AT2G33340 26.050 2.96e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0091 K04536 - gmx:100811645 732.25