Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0088 ATGGCAGCCTCCGCCACCTCCTCCGGCGGCGCTCTGCCGGAGCAGCTAACCAACCGAACTCCAATTTTGGGCATGAAGCTCTACGTCTTAATAGTCGGCTTCGTCGTGATCATGGTGGTAGCATTGGTGATCGTGATCTTGGTTTGCGTTCGGCAGAGGCTGAAGAAGAGGAAAATGCGAGTGAAGCACAGCTCCGGCACAATCCCGCTGGTGTCGAAGGAGATCGTGGAGGTTAACACAGTGGATCTCGCGCACCACCTCAAAATGGAAGACGACGTCACCGTTGATGCTGATCAGAAGAAGAAGTCAGAGATGAAGGTTGATGAGAATAACGAAGAAGGGAGAAGAAGAAAGGAGGATGAGAAGAATAGTGAGAGTAGGAGGGTGTCGGTGGAGTGTACGAACATAGGGTGGGGGAGGTGGTTCAGCCTCGAGGAGCTGCAGGAAGCCACCGACGGATTTGCTGAAGGCAATGTGATCGGTGAAGGAGGCTATGGGATTGTCTACAGAGGACTTCTTCGCGACGCTTCTGTCGTCGCTGTCAAGAATCTTCTCAACAACAAGGGTCAAGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAGGCATAAAAATTTGGTGCGGTTAGTTGGATATTGTGCAGAAGGTGCTCAGAGGATGCTTGTTTATGAATATATTGACAATGGAACTTTGGAGCAGTGGCTTCATGGTGATGTAGGCCCTGTTAGCCCCTTGACTTGGGATATACGAATGAGGATTGCTGTTGGCACTGCAAAAGGATTAGCCTATTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAATTGGAATGCCAAAGTATCAGACTTTGGCCTGGCCAAGCTCTTAGGATCTGAGAAAAGCTACGTGACGACGCGTGTAATGGGGACATTCGGATATGTTTCACCTGAGTATGCAAGCACGGGTATGCTTAACGAGGGAAGTGATGTGTACAGTTTTGGGATTCTACTTATGGAACTAATTACAGGAAGAAGTCCCATAGATTATTCTAGACCACCTGCAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTAACAAGTCGTCGTGGTGAGGAGCTGATTGATCCATTAATTGAGATGAAGCCATCTCCAAGATCATTGAAGCGAGCATTACTGGTTTGTCTTCGCTGTATAGATTTGGATGTTGGTAAGCGCCCAAAGATGGGTCAAATTGTTCACATGCTCGAGGCCGATGATTTTCCCTATCGTTCTGAGCTTCATACTATTAGAGAGAAAGGTCCTGTCTCCAGCAAAGTTCCTCCTTATCCAACAAGGCTTGTGGATCCTGTGGATAAATCAAGCTGGAGATGA 1401 0.4732 MAASATSSGGALPEQLTNRTPILGMKLYVLIVGFVVIMVVALVIVILVCVRQRLKKRKMRVKHSSGTIPLVSKEIVEVNTVDLAHHLKMEDDVTVDADQKKKSEMKVDENNEEGRRRKEDEKNSESRRVSVECTNIGWGRWFSLEELQEATDGFAEGNVIGEGGYGIVYRGLLRDASVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVRLVGYCAEGAQRMLVYEYIDNGTLEQWLHGDVGPVSPLTWDIRMRIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKNWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPAEMNLVDWFKGMVTSRRGEELIDPLIEMKPSPRSLKRALLVCLRCIDLDVGKRPKMGQIVHMLEADDFPYRSELHTIREKGPVSSKVPPYPTRLVDPVDKSSWR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0088 466 PANTHER OS03G0227900 PROTEIN 11 442 - -
Aev08g0088 466 CDD STKc_IRAK 160 426 - -
Aev08g0088 466 MobiDBLite consensus disorder prediction 443 466 - -
Aev08g0088 466 SMART serkin_6 154 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0088 466 SUPERFAMILY Protein kinase-like (PK-like) 129 426 IPR011009 -
Aev08g0088 466 MobiDBLite consensus disorder prediction 94 126 - -
Aev08g0088 466 Gene3D Phosphorylase Kinase; domain 1 111 229 - -
Aev08g0088 466 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Aev08g0088 466 ProSiteProfiles Protein kinase domain profile. 154 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0088 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Aev08g0088 466 Pfam Protein kinase domain 156 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g0088 466 Gene3D Transferase(Phosphotransferase) domain 1 230 437 - -
Aev08g0088 466 PANTHER OS01G0323000 PROTEIN 11 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0088 Aev-Chr8 494569 500273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0088 116 426 Receptor kinase-like Gene Family AT4G02010 44.954 3.98e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aev08g0088 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0088 - - gmx:100779420 676.396