Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0072 ATGGCTTCCTCAAGCGGAACATCATCGGGGTCATCTTCTATGGTCCAAAACTCTGGCTCAGAGGAGGACTTGCAGGCGCTGATGGACCAGAGGAAGAGGAAGAGAATGCTCTCGAACCGGGAATCGGCGAGGCGGTCCAGAATGAGGAAGCAGAAGCACTTGGATGATCTGGCATCCCAGGTGGCTCAGCTGAGGAGCGAGAATCAGCAGATTCTGACCTCACTCAACGTCACCACGCAGCAGTGCTTGGCCATTGAGTCAGAGAACTCTGTTCTCAGAGCACAAGTGGGCGAGCTCAGCCACAGGCTTGAGTCCTTGAACGAGATCATCGACTTCTTGAATGCCACCAACAATGGAAGCTCCTTCATTGAGCCTGCTGCTGACACCTTCTTCAACCCTCTGAGCATGGCCTATTTGAACCAGCCCATCATGGCTTCTCCAGACATGTTTCAGTACTGA 459 0.5316 MASSSGTSSGSSSMVQNSGSEEDLQALMDQRKRKRMLSNRESARRSRMRKQKHLDDLASQVAQLRSENQQILTSLNVTTQQCLAIESENSVLRAQVGELSHRLESLNEIIDFLNATNNGSSFIEPAADTFFNPLSMAYLNQPIMASPDMFQY* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0072 152 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Aev08g0072 152 MobiDBLite consensus disorder prediction 1 57 - -
Aev08g0072 152 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Aev08g0072 152 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Aev08g0072 152 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 150 - -
Aev08g0072 152 Pfam bZIP transcription factor 31 89 IPR004827 GO:0003700|GO:0006355
Aev08g0072 152 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Aev08g0072 152 Coils Coil 47 74 - -
Aev08g0072 152 MobiDBLite consensus disorder prediction 1 24 - -
Aev08g0072 152 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Aev08g0072 152 PANTHER BZIP TRANSCRIPTION FACTOR 1 150 - -
Aev08g0072 152 MobiDBLite consensus disorder prediction 25 56 - -
Aev08g0072 152 Gene3D - 29 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0072 Aev-Chr8 415770 416228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0072 25 152 bZIP Transcription Factor Family AT4G34590 55.396 1.06e-45 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev08g0072 bZIP_1 9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0072 K25786 - rcu:8285748 218.394